Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2967g00043 ATGGAATATTTAGGGCTATCTGGGGTTCTTATTGCCTTCGTGGCATCACTCTGGCTCTTCATATTAACATTTACTTGGTGGGTTTCCCCAATCCAAACACATAGGAAGCTTAAGAGATACGGGTTTGGAGGGCCAAACCCAAGTTTTCCACTTGGAAATATTAAAGAGATGAGAAGAAAGAAAAACATTCATTCTTCCATTGTACCCTCAAATCTCACACATGATATACACTCGAACGTTTTCCCCTACTTTTCTTGCTGGCAGAAATCTCATGGTAAAGTGTTCATCTACTGGCTAGGCACAGAACCATTTTTGTACGTTGCAGACCCAGAGTTCTTGAAGAAAATGTCAAAAGAGGTGATGGCAAAGAGATGGGGAAAACCTAGTGTGTTTAGAAATGACAGAGACCCCATGTTCGGGAGTGGTTTGGTCATGGTCGAGGGTAACGATTGGGTTCGTCACCGTCACATTGTTGCCCCTGCTTTCAATCCCCTTAACTTGAAGGCCATGGGAAGCATGATGGTTGAGTCTACAAACCAAATGATAGAAAGATGGGCTACACAAATAAATTCAGGAAACCCCGAAATCGACGTGGAGAGAGAGATTATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGACGAAAATGCTAGAGAGGTGTTTCACAAATTACGAGCATTGCAAATGACTCTTTTTAAGACCAATAGGTATGTAGGGGTTCCCTTTGGCAAGTATTTCAATGTCAAGAAAACCCTAGAGGCCAAGAAACTTGGCAAAGAAATCGATGAGCTATTGTTGTCCATCATAGAAACTCGGAAGAAATCACCCAAAAAGGGTTCTCAACAAGATTTATTAGGTTTGTTGCTTCAAGAAAATCATCAACAAGTTGATGGCAAATCAGGAAAGACATTAACAATGCGAGAACTGGTTGATGAATGCAAGACCTTCTTCTTTGGTGGCCATGAAACCACAGCACTTGCTATCACATGGACTCTGCTTCTTCTCGCCATGCATGAAGATTGGCAAAACCAGTTGAGAGATGAGATAAGAGAAGTTGTTGGTAACGACGACCTTGATATCTCTATGCTTTCTGGTTTAAAGAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTATACCCACCAGCACCGAATGTGCAAAGGCAAGCAAGAGAAGATATTAAAGTTGATGATTTAACAGTGCCTAATGGAACCAACTTGTGGATCGATGTCGTAGGAATGCACCATGACCCTGCATTGTGGGGAAAGGATGCGAATGAGTTTAGACCAGAGAGGTTCATGGATGATGTCAATGGTGGGTGCAACCATAAGATGGGGTACTTACCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGTCCTTTATGGAGTACAAGATTGTATTAACCCTACTTCTCTCTAGGTTTAGTTTTAAACTTTCCCCAGGTTACCATCATTCACCATCTATCATGCTCTCACTAAGGCCCGCTTATGGATTACCACTCATAGTTCAGCCCCTTTAG 1545 0.4214 MEYLGLSGVLIAFVASLWLFILTFTWWVSPIQTHRKLKRYGFGGPNPSFPLGNIKEMRRKKNIHSSIVPSNLTHDIHSNVFPYFSCWQKSHGKVFIYWLGTEPFLYVADPEFLKKMSKEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPLNLKAMGSMMVESTNQMIERWATQINSGNPEIDVEREIIATAGEIIARTSFGMKDENAREVFHKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIETRKKSPKKGSQQDLLGLLLQENHQQVDGKSGKTLTMRELVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIREVVGNDDLDISMLSGLKKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDLTVPNGTNLWIDVVGMHHDPALWGKDANEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKLSPGYHHSPSIMLSLRPAYGLPLIVQPL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2967g00043 514 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Gabi2967g00043 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 505 - -
Gabi2967g00043 514 Gene3D Cytochrome P450 27 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 Pfam Cytochrome P450 77 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00043 514 SUPERFAMILY Cytochrome P450 73 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2967g00043 Gabi-Chr2967 420402 422944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2967g00043 1 514 Cytochrome P450 AT5G52400 59.091 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2967g00043 - - gmx:100785284 904.434