Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2967g00042 ATGGAGCTTTTAGTGCTAACGGGGGCTCTTAGCTTCGTGACAATGTTAACTCTCTTCTTGCTCTTGAAACTAACGTTTTGTTGGTGGATTTTGCCCATCCAAACACATCGAAAGCTTAAAAGATGTGGGTTTGGAGGACCAACCCCAAGTTTTCCAATTGGAAACATTCAAGAGATGAAAAAGAAGAATAGCGTTAATGCTTCACTCGGGTACTCAAAACTCACCCATGATATACATTCCACCGTTTTTCCCTACTTTTCTCGGTGGCAAATTTCTCATGGTAAGGTGTTTATCTACTGGCTGGGGACGGAACCATTTTTGTACATTGCAGAGCCAGAGTTCTTGAAGAAAATGTCCACAAAGGTGATGGCCAAGAGATGGGGAAAGCCTAGTGTCTTTAGAAATGACAGAGACCCCTTGTTTGGGAGTGGTTTGGTCATGGTTGAGGGCGACGATTGGGTTCGTCACCGGCATGCTGTTGCCCCCGCATTTTCACCTCTTAACTTGAAGACAATGGCAAGCATAATGGTGGAGTCAACGAAGCAAATGCTAGAGAGGTGGGGCACTCAAATTAACTGCGGCAACCCTGAAATCGATGTGGAGAAAGAGATAATAGCAACGAGCGGAGAGATCATAGCAAGGACAAGCTTTGGCATGAAATACAAAGACGTCAAGGCAGTGTTTGAAAAATTACGAGCCCTACAAATAACTCTTTTTAACACCACCCGATATGTTGGTGTTCCCTTTGGCAAGTGCTTCAACCTCAAGAAAACCCTAGAAGCCAAAAAACTTGGTAAAGATATCGATAGGATCTTGTTGTCCATCATAACGGCTCGAATGAAATCAATCAAAGGACAAGATCAACAGGATTTATTAGGGCTATTGTTGCAAGAAAATCATCAAGATGATGATGACCAGTTAGGGAAGGCATTAACAACACGAGATCTTGTTGATGAGTGCAAGACCTTCTTCTTTGGTGGCCATGAGACAACAGCACTTGCTATCACATGGACTTTGTTTCTTCTAGCTATCCATGAACATTGGCAAATCCAGTTGAGAAATGAGATAAGGGAAGTGGTGGGTGACAACGAAATTGATGTCAATGTGGTTGCTGGGCTGAGAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTATACCCACCAGCACCGAATGTGCAAAGGCAAGCAAGAGAAGACATTAAAGTTGATGACTTAACAGTGCCGAATGGAACCAACTTGTGGATCGATGTCGTAGCAATGCACCATGACCCTGTATTGTGGGGCAAGGATGCGAATGAGTTTAGACCAGAGAGGTTCATGGATGATGTCAATGGTGGGTGCAACCACAAGATGGGGTACATACCTTTTGGGTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGTCCTTTATGGAGTATAAGATTGTATTAACCCTACTCCTCTCTAGGTTTAGTTTCAAACTTTCACAAGGATATCAACATTCTCCTTCTATCATGCTCTCCCTAAGACCAACATGTGGTCTTCCCCTCATAGTTCAGCCCCTTTAA 1551 0.4346 MELLVLTGALSFVTMLTLFLLLKLTFCWWILPIQTHRKLKRCGFGGPTPSFPIGNIQEMKKKNSVNASLGYSKLTHDIHSTVFPYFSRWQISHGKVFIYWLGTEPFLYIAEPEFLKKMSTKVMAKRWGKPSVFRNDRDPLFGSGLVMVEGDDWVRHRHAVAPAFSPLNLKTMASIMVESTKQMLERWGTQINCGNPEIDVEKEIIATSGEIIARTSFGMKYKDVKAVFEKLRALQITLFNTTRYVGVPFGKCFNLKKTLEAKKLGKDIDRILLSIITARMKSIKGQDQQDLLGLLLQENHQDDDDQLGKALTTRDLVDECKTFFFGGHETTALAITWTLFLLAIHEHWQIQLRNEIREVVGDNEIDVNVVAGLRKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDLTVPNGTNLWIDVVAMHHDPVLWGKDANEFRPERFMDDVNGGCNHKMGYIPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKLSQGYQHSPSIMLSLRPTCGLPLIVQPL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2967g00042 516 Pfam Cytochrome P450 81 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 SUPERFAMILY Cytochrome P450 76 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Gabi2967g00042 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 501 - -
Gabi2967g00042 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2967g00042 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2967g00042 Gabi-Chr2967 389737 393161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2967g00042 12 516 Cytochrome P450 AT5G52400 60.078 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2967g00042 - - gmx:100810679 848.58