Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2967g00039 ATGGGGAAAAATGAGTTTCTCACACCTAAAGCAATTGCCAATCGAATCAAAGCAAAAGGACTACAGAAACTTAGGTGGTATTGCCAAATGTGCCAGGAACAATGCCGAGATGAGAATGGGTTTAAATGCCACTGCATGAGTGAAGGGCACCAGTGTCAAATGCAAGTTTTAGGACAAAACCCAAATCAGATAATTGAGGGCTATTCTGAAGAGTTTGAGAGCGCTTTTCTTGAGCACGTGAAGCGCAGCCACCGATTCAGCCGTGTTGCTGCCACTGTAGCTTATAATGAATACATAAATGATAGAGACCACCTTCATATGAACTCCACTCAATGGGCCAGGCTTACTGAGTTTGTAAAGTACTTGGGTCGAACTGGCCAGTGTAAGGTTGAAGAAACACCCAAGGGATGGTTCATTACATATATAGATAGAGATTCAGAAACCCTTTTCAAGGAGAGGATGAAGAATAAGAGAATTAAAGCAGATATGGTGGACGAAGAAAAGCAAGAGAATGAGATCATGAAACAGATTGAAAAGGCTGAGCAATTGATACCTACTCCCGAGTCTGATCAGCCTTCACATGTTGATCATCCGAGGGAATTAAATGTTGAAGATGGAGTTAAGATAGGATTTTCTCTTGGGTCATCGGTTAGACTTGTGACCAAAGAAAAGAGTGAAGCATCGAGGGTGGTGGCGTTTGATGATGAAGAGAAATATGAGGAAAGGAATCCTAGAAACTATTTGAAGAGGAAAGAAAGTGGTGGAGGAAAATCAACTTTGGATGAAATGATGAAGGATGAAGAGAAGAAAAAGGAAAAAATTAACAGGAAGGATTATTGGTTGCACGAGGGAATTGTTGTTAAGGTTATGAGCAAAGTCTTGACTAAGAAGGGATACTACGAGGAAAAGGGTGTTGTGCAGAAGGTGATTGACAAGTATGTTGGGGAAATACTAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAGGCAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGCCGTGTAAAAATAGTAAATGGGGCATATCGTGGATCAATTGCCAGGCTGTTGAGTGTTGGGTGTGGATACAGATCTTTTTTGTGCTAA 1113 0.4151 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQEQCRDENGFKCHCMSEGHQCQMQVLGQNPNQIIEGYSEEFESAFLEHVKRSHRFSRVAATVAYNEYINDRDHLHMNSTQWARLTEFVKYLGRTGQCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQENEIMKQIEKAEQLIPTPESDQPSHVDHPRELNVEDGVKIGFSLGSSVRLVTKEKSEASRVVAFDDEEKYEERNPRNYLKRKESGGGKSTLDEMMKDEEKKKEKINRKDYWLHEGIVVKVMSKVLTKKGYYEEKGVVQKVIDKYVGEILMLESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSIARLLSVGCGYRSFLC 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2967g00039 370 Gene3D - 60 160 IPR038254 -
Gabi2967g00039 370 Pfam KN17 SH3-like C-terminal domain 276 329 IPR041330 -
Gabi2967g00039 370 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 361 IPR037321 -
Gabi2967g00039 370 SMART Kin17_mid_2 52 178 IPR019447 -
Gabi2967g00039 370 Gene3D - 338 363 IPR014722 -
Gabi2967g00039 370 Pfam Domain of Kin17 curved DNA-binding protein 53 177 IPR019447 -
Gabi2967g00039 370 Gene3D - 284 337 - -
Gabi2967g00039 370 MobiDBLite consensus disorder prediction 244 269 - -
Gabi2967g00039 370 Coils Coil 257 277 - -
Gabi2967g00039 370 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Gabi2967g00039 370 Coils Coil 163 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2967g00039 Gabi-Chr2967 348960 352733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2967g00039 1 361 C2H2 Transcription Factor Family AT1G55460 65.183 1.26e-175 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2967g00039 K13102 - gmx:100785931 610.912