Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2963g00016 ATGGAAAATGTTGTTGATGTTGTTGCTTCGGATCGTAGTAAAGCAATTGAAGAGCTTGTGAGAGGGAGTGAGTTTGCTAACCAGCTTCGACAACTCATCATCAATGGTGGTGATGATCAAGGTCTTGAGTCAGCAACCCCATTTGCCCAAAGCCTTGTGACGAATGTTCTAAACTCCTTCACCAACGCCATCTTCCTCTTGAACAAATATCCCACTTCCCAATCCCATGATCAAGTTTCTCAGGTTCAAAAAAGTGCCTCTTCTTCCTTCATTACTCCCACTAAATCTGAGGATTCTCAAGAAAGTTGCAAGAGTTCAACCATTAAGGACAGAAGAGGGTGTTACAAGAGAAGAAGAACTACACAAACTTATGAGACGTTGTCCAAAACTCCAACAGCTGATGGTCATCAATGGAGAAAGTATGGCCAAAAATTGATCCTCAAATCCAAATACTCAAGGAACTACTACAGGTGCACTCACAAGATTGATCAGGGTTGCAAAGCAACAAAACAGGTGCAGCAAGTTCAAGAGGAGCCTCCATTGCATAGGATCACCTACTATGGTCATCACACTTGCACAAACTTGTTACTAAACCCTGAGATCATACTTGATTCGAATTCTGCTCCTAATGACTCTTCCATATTGCTTAGCTTTAACAATACCTTCCCAATTCCAACAAAACAAGAGTTCCCCTTTTCATCACCATCTTTTCCCTCTCCACCACTTGAGGAGTGCAAGGAGGAACTTCCTTCAATATCTTTCTCAGATAATTACGTACTCCCTGTCGACCCCACCTTAGATAATTCGTTTAGGCATGACCCTCTATCATCTACCCTCCAATCTCATCACGGTGATGTCTTGAATGATTCTTTTGACCTTGTTGATATCTTACAGCATTTCGCTGGTTTTTTATGA 915 0.4175 MENVVDVVASDRSKAIEELVRGSEFANQLRQLIINGGDDQGLESATPFAQSLVTNVLNSFTNAIFLLNKYPTSQSHDQVSQVQKSASSSFITPTKSEDSQESCKSSTIKDRRGCYKRRRTTQTYETLSKTPTADGHQWRKYGQKLILKSKYSRNYYRCTHKIDQGCKATKQVQQVQEEPPLHRITYYGHHTCTNLLLNPEIILDSNSAPNDSSILLSFNNTFPIPTKQEFPFSSPSFPSPPLEECKEELPSISFSDNYVLPVDPTLDNSFRHDPLSSTLQSHHGDVLNDSFDLVDILQHFAGFL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2963g00016 304 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00016 304 MobiDBLite consensus disorder prediction 78 101 - -
Gabi2963g00016 304 SUPERFAMILY WRKY DNA-binding domain 128 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00016 304 MobiDBLite consensus disorder prediction 78 105 - -
Gabi2963g00016 304 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00016 304 ProSiteProfiles WRKY domain profile. 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00016 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 207 IPR044810 GO:0003700
Gabi2963g00016 304 Pfam WRKY DNA -binding domain 134 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2963g00016 Gabi-Chr2963 210356 211635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2963g00016 5 205 WRKY Transcription Factor Family AT3G56400 39.336 1.38e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2963g00016 WRKY 3.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2963g00016 - - gmx:102670495 286.189