Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2963g00014 ATGGACGATGTTGTTGTTTCGGATCATAGTAAAGCAATTGAGGAGCTTGTGAGAGGGCGTGAGTTTGCTAACCAGCTTAAACTACTCTTCATCAATGGTTGTGATGATCATGATCATGATCATGATCATGATCATGAGTCAGCAACCCCATTTGCCCAAACCCAAAGCCTTGTGAAGAATGTTCTAAACTCCTTCACCAACGCCTTCTTCCTCTTGAACAAATACCCCACTTCCCAATCCCATGATCAAGTTTCTCAGATTCAAAAAAGTCCCTCTTCTTCCTTCATTACTCCCACTAAATCTGAGGACTCTCAAGAAAGTTGCAAGACTTCAACCATTAAGGACAGAAGAGGGTGTTACAAGAGAAGAAGAACTACACAAACATATGAGAAGTGGTCCAAAACTCCAACAGCTGATGGCCATCACTGGAGAAAGTATGGCCAAAAATTGATCCTCAATTCCAAATACTCAAGGAACTACTACAGGTGCACTCACAAGATTGATCAGGGTTGCCAAGCAACAAAACAGGTGCAGCAAGTTCAAGAGGAGCCTCCATTGCATAAGATCACCTATTATGGTCACCACACTTGCACAAACTTGTTACTAAACCCTGAGATCATACTTGATTCCAATTCTGCTCCTAATGGCTCTTCCATATTGCTTAGCTTTAACAACACCTTCCCAATTCCAACAAAACAAGAGTGCCCCTTTTTATCACCATCTTTTCCCTCTCCACCACTTGAGGAGTGTAAGGAGGAACTTCCTTCAATATCTTCCTCAGATGATTACCTACTCTCCCCTGAGCCCACGTTAGATAATAGTTTTTTCAGGGATGACACCTTATCATCTACCCTCCAATCTCATCATACAGATCTCATGTATGATTCTTTTGACCTTGATGATATCTTGAAGCATTTCCCTGGTCTTTTATGA 933 0.4169 MDDVVVSDHSKAIEELVRGREFANQLKLLFINGCDDHDHDHDHDHESATPFAQTQSLVKNVLNSFTNAFFLLNKYPTSQSHDQVSQIQKSPSSSFITPTKSEDSQESCKTSTIKDRRGCYKRRRTTQTYEKWSKTPTADGHHWRKYGQKLILNSKYSRNYYRCTHKIDQGCQATKQVQQVQEEPPLHKITYYGHHTCTNLLLNPEIILDSNSAPNGSSILLSFNNTFPIPTKQECPFLSPSFPSPPLEECKEELPSISSSDDYLLSPEPTLDNSFFRDDTLSSTLQSHHTDLMYDSFDLDDILKHFPGLL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2963g00014 310 MobiDBLite consensus disorder prediction 82 106 - -
Gabi2963g00014 310 Pfam WRKY DNA -binding domain 139 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00014 310 Gene3D WRKY domain 121 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00014 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 29 211 IPR044810 GO:0003700
Gabi2963g00014 310 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00014 310 SUPERFAMILY WRKY DNA-binding domain 133 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00014 310 ProSiteProfiles WRKY domain profile. 139 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2963g00014 310 MobiDBLite consensus disorder prediction 82 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2963g00014 Gabi-Chr2963 170461 171642 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2963g00014 11 210 WRKY Transcription Factor Family AT3G56400 36.190 5.83e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2963g00014 WRKY 4.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2963g00014 - - gmx:100805895 289.656