Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2963g00012 ATGGAATCTAATACCCCTACAAACACTGTCCCCTTTGAAATATCATCTTCATCTGCATCTGCATCTGCATCTGCATCCCGAGTGCAGAGGATCCGTCACAAAAGTGTTCAATTTGATGATAATATACTCTTACATGATGATAATGCCAGGCAAATCTACATCAATGATCCCATCAAGACTAATCATAAGTATGAGTTCACGGGGAATGAGATTCGAACCAGCAAATATACTATATTCACATTCTTGCCCAAGAATCTCTTCATTCAGTTTCACCGCCTTGCTTATCTCTATTTCCTTGCCATTGCCGCCCTCAACCAGCTTCCTCCCTTGGCTGTCTTTGGCAGAACCGTTTCCCTTTTCCCCCTCTTGTTCGTTCTCTGTGTCACCGCCATTAAGGATGCCTATGAGGATTGGCGCAGACACAGGTCCGATCGCAACGAGAACAATCGCGAGTCTCTCGTGCTTCAATCTGGTCAGTTCCAGCCCAAGAGGTGGATGAAATTACAAGCTGGTGATGTTGTTAAAATCTTTGCTGATGAGATGATTCCTGCTGACATGGTTTTGTTGGGGACGAGTGATCCGAGCGGCCTTGCCTATATTCAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACAAGGTATGCCAAGCAGGAAACAGCTTCATCAGTGTCGTCGGAAGCTTGTGATGTCTCTGGAGTTATTAGATGTGAGCAACCTAACCGGAATGTTTATGAGTTCACAGCCAATGTGGAGTTCAATGGGTATAAGTTTCCCCTTAACCAGTCAAACATTGTGCTTCGTGGTTGCGTGCTGAAGAACACCGAGTGGATAATCGGTGTTGTGGTTTATGCAGGACAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAATAGAGAAACCTTATGGTTGTCCGTTTTTCTTTTTATCATGTGTTCGGTTGTGGCCCTTGGGATGGGTCTCTGGCTGGTACGCCACAAGAATCAGCTTGATACCTTACCTTATTACAGAAAAACGTACTTCAATGGCCCAGATAATGGAAAGAAATATAAATATTATGGGATACCAATGGAAACGTTCTTCTCCTTTTTGAGTTCTATTATAGTTTTTCAGATAATGATACCAATTTCTCTTTACATCACGATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGATTGAAGATGGGGATATGTATTGTGCCAACTCTGGATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTGTTTTCGGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTCCGGAGAGCCAGTGTACATGGAAAGAATTATGGGAGCTCCTTGCTTATGGCTAATGATAGTACAGGGGCAGCTGTTAATTGTAATCGAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAATTAATGGCATTGTTGCAGAAAGGCTCAAATGGAGACGAAAGAATTGCTGCTCATGAGTTTTTCCTTACACTGGCTGCTTGTAATACTGTGATCCCTATTCTTAGTGGCAGTTGTGGAGCAAGTGAATCAAATGAAGATGTAGATTGTATTGATTACCAGGGAGAATCTCCTGATGAAATAGCTCTAGTTTCTGCAGCCTCTGCATATGGGTATACTCTTTTCGAGCGAACATCTGGACATATTGTTATTGACATCCATGGCGAGAAACTTAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTGTTATTCGGTTTCCTGACAATTTTGTAAAGGTGTTAGTAAAAGGCGCCGATTCTTCAATGTTTAGCATTTTAGCAAATGACAGTGCAAGCAATGATAGCGTACGGCATGAAACTCACAGTCATTTGAGTGAATATTCTTTGCAAGGTTTACGAACTCTTGTACTTGCCTCTAGGGATCTTTCAGATGCAGAACTTGAGGATTGGCAAAGCATGTATGAACATGCGAGCACTTCATTGACTGACCGAGCTTCAAAATTACGTCAAACAGCAGCTCTTTTAGAATGCAACCTAAAGTTACTGGGAGCAACTGGAATTGAGGACAAGCTTCAAGAGGGTGTACCGGAAACAATTGAGTCCCTTCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACTGCAATTTCAATTGGCCTTTCCTGCAAACTTCTGAGTGCAGATATGCAGCTGATAATTATAAATGGCACTTCAGAGGTTGAATGCAGAAATCTCTTGGCTGAAGCTAAAGCTAAAGCCAAATATGGTGTGAGATCTTCAAGTAGAGGACATCAGAATCCAGGTGATCCTGATATTCCCTATGATACGAAATCATTGAGCATGCCCAAGTGGAATCCAGGAAAGGAAGAAGGGACTACTGCTCCCTTGGCACTCATAATTGATGGAACTAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAATTTCCTGTACGGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAAGCAGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACATTGGCTATAGGTGATGGGGCCAACGATGTTTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGACGCCAAGCAGTGATGGCATCAGATTTTGCAATGGGACAATTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGACACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAACGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCAGCATTGACAGATTGGAGTAGTGTATTCTATTCGGTGATATACACATCTATCCCCACTATCATTGTTGGTATTCTGGACAAAGACTTGAGTCGTAGGACACTGTTGCAGTATCCAAAACTCTATTGTGCGGGTCACCGGCAAGAGGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACGCTATGGCAGAGCCTTGTGCTCTTCTACATTCCCCTATTCACCTACAAGGACAGCTCAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTTCAGTTGTTATCCTCGTAAATATACACCTGGCTATGGACATTAACAATGGGATATTAATCATTCATGTTGCTGTGTGGGGATCAATAATCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCCAACTACTGGACTATTTATCATTTGGCAAGGTCCCCTACATATTGGATAACAATTTTGCTTATAACAATTGTGGCATTGCTCCCTCGCTTTACTTGCAAAGTTGTTTATCAAATTTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGGCAATGAGAAAACAACATGATAATTTGCAGTCAAGGCAACAAGTTTCCAGTTAA 3528 0.4184 MESNTPTNTVPFEISSSSASASASASRVQRIRHKSVQFDDNILLHDDNARQIYINDPIKTNHKYEFTGNEIRTSKYTIFTFLPKNLFIQFHRLAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDRNENNRESLVLQSGQFQPKRWMKLQAGDVVKIFADEMIPADMVLLGTSDPSGLAYIQTMNLDGESNLKTRYAKQETASSVSSEACDVSGVIRCEQPNRNVYEFTANVEFNGYKFPLNQSNIVLRGCVLKNTEWIIGVVVYAGQETKAMLNSAASPSKRSKLESYMNRETLWLSVFLFIMCSVVALGMGLWLVRHKNQLDTLPYYRKTYFNGPDNGKKYKYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYCANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLLMANDSTGAAVNCNRRWKLKSEIAVDSELMALLQKGSNGDERIAAHEFFLTLAACNTVIPILSGSCGASESNEDVDCIDYQGESPDEIALVSAASAYGYTLFERTSGHIVIDIHGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNFVKVLVKGADSSMFSILANDSASNDSVRHETHSHLSEYSLQGLRTLVLASRDLSDAELEDWQSMYEHASTSLTDRASKLRQTAALLECNLKLLGATGIEDKLQEGVPETIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQLIIINGTSEVECRNLLAEAKAKAKYGVRSSSRGHQNPGDPDIPYDTKSLSMPKWNPGKEEGTTAPLALIIDGTSLVYILEKELESELFDLAISCTVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGILDKDLSRRTLLQYPKLYCAGHRQEAYNMQLFWITMIDTLWQSLVLFYIPLFTYKDSSIDIWSMGSLWTISVVILVNIHLAMDINNGILIIHVAVWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLITIVALLPRFTCKVVYQIFWPSDIQIAREAEAMRKQHDNLQSRQQVSS 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2963g00012 1175 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1148 IPR023298 -
Gabi2963g00012 1175 Gene3D - 124 295 - -
Gabi2963g00012 1175 Gene3D - 548 678 IPR023299 GO:0000166
Gabi2963g00012 1175 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1162 - -
Gabi2963g00012 1175 Pfam E1-E2 ATPase 150 396 - -
Gabi2963g00012 1175 SFLD p-type atpase 422 932 IPR044492 -
Gabi2963g00012 1175 CDD P-type_ATPase_APLT_Dnf-like 68 1041 - -
Gabi2963g00012 1175 ProSitePatterns E1-E2 ATPases phosphorylation site. 440 446 IPR018303 -
Gabi2963g00012 1175 Gene3D - 700 921 IPR023214 -
Gabi2963g00012 1175 FunFam Phospholipid-transporting ATPase 699 921 - -
Gabi2963g00012 1175 SUPERFAMILY HAD-like 425 925 IPR036412 -
Gabi2963g00012 1175 Pfam Cation transport ATPase (P-type) 538 624 - -
Gabi2963g00012 1175 FunFam Phospholipid-transporting ATPase 546 690 - -
Gabi2963g00012 1175 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Gabi2963g00012 1175 PRINTS P-type cation-transporting ATPase superfamily signature 438 452 - -
Gabi2963g00012 1175 NCBIfam HAD-IC family P-type ATPase 698 751 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2963g00012 1175 NCBIfam HAD-IC family P-type ATPase 371 461 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2963g00012 1175 NCBIfam HAD-IC family P-type ATPase 848 967 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2963g00012 1175 NCBIfam phospholipid-translocating P-type ATPase 66 1156 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi2963g00012 1175 SFLD C1.7: P-type atpase like 422 932 - -
Gabi2963g00012 1175 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 444 716 IPR023299 GO:0000166
Gabi2963g00012 1175 Pfam Phospholipid-translocating ATPase N-terminal 52 117 IPR032631 -
Gabi2963g00012 1175 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1149 IPR032630 -
Gabi2963g00012 1175 SUPERFAMILY Calcium ATPase, transduction domain A 149 291 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2963g00012 Gabi-Chr2963 144642 153136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2963g00012 29 1160 Primary Pumps ATPases AT5G04930 56.365 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2963g00012 K14802 - gmx:100788740 1984.92