Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2963g00011 ATGGAATCTAATACCCCTACAAACACTGTCCCCTTTGAAATATCATCTTCATCTGCATCTGCATCTGCATCTGCATCCCGAGTGCAGAGGATCCGTCACAAAAGTGTTCAATTTGATGATAATATACTCTTACATGATGATAATGCCAGGCAAATCTACATCAATGATCCCATCAAGACTAATCATAAGTATGAGTTCACGGGGAATGAGATTCGAACCAGCAAATATACTATATTCACATTCTTGCCCAAGAATCTCTTCATTCAGTTTCACCGCCTTGCTTATCTCTATTTCCTTGCCATTGCCGCCCTCAACCAGCTTCCTCCCTTGGCTGTCTTTGGCAGAACCGTTTCCCTTTTCCCCCTCTTGTTCGTTCTCTGTGTCACCGCCATTAAGGATGCCTATGAGGATTGGCGCAGACACAGGTCCGATCGCAACGAGAACAATCGCGAGTCTCTCGTGCTTCAATCTGGTCAGTTCCAGCCCAAGAGGTGGATGAAATTACAAGCTGGTGATGTTGTTAAAATCTTTGCTGATGAGATGATTCCTGCTGACATGGTTTTGTTGGGGACGAGTGATCCGAGCGGCCTTGCCTATATTCAGACAATGAATTTGGATGGAGAATCGAATTTGAAGACAAGGTATGCCAAGCAGGAAACAGCTTCATCAGTGTCGTCGGAAGCTTGTGATGTCTCTGGAGTTATTAGATGTGAGCAACCTAACCGGAATGTTTATGAGTTCACAGCCAATGTGGAGTTCAATGGGTATAAGTTTCCCCTTAACCAGTCAAACATTGTGCTTCGTGGTTGCGTGCTGAAGAACACCGAGTGGATAATCGGTGTTGTGGTTTATGCAGGACAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAATAGAGAAACCTTATGGTTGTCCGTTTTTCTTTTTATCATGTGTTCGGTTGTGGCCCTTGGGATGGGTCTCTGGCTGGTACGCCACAAGAATCAGCTTGATACCTTACCTTATTACAGAAAAACGTACTTCAATGGCCCAGATAATGGAAAGAAATATAAATATTATGGGATACCAATGGAAACGTTCTTCTCCTTTTTGAGTTCTATTATAGTTTTTCAGATAATGATACCAATTTCTCTTTACATCACGATGGAGTTGGTTCGTTTGGGTCAGTCATACTTCATGATTGAAGATGGGGATATGTATTGTGCCAACTCTGGATCAAGGTTCCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTGTTTTCGGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTCCGGAGAGCCAGTGTACATGGAAAGAATTATGGGAGCTCCTTGCTTATGGCTAATGATAGTACAGCAGGGGCAGCTGTTAATTGTAATCGAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAATTAATGGCATTGTTGCAGAAAGGCTCAAATGGAGACGAAAGAATTGCTGCTCATGAGTTTTTCCTTACACTGGCTGCTTGTAATACTGTGATCCCTATTCTTAGTGGCAGTTGTGGAGCAAGTGAATCAAATGAAGATGTAGATTGTATTGATTACCAGGGAGAATCTCCTGATGAAATAGCTCTAGTTTCTGCAGCCTCTGCATATGGGTATACTCTTTTCGAGCGAACATCTGGACATATTGTTATTGACATCCATGGCGAGAAACTTAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTGTTATTCGGTTTCCTGACAATTTTGTAAAGGTGTTAGTAAAAGGCGCCGATTCTTCAATGTTTAGCATTTTAGCAAATGACAGTGCAAGCAATGATAGCGTACGGCATGAAACTCACAGTCATTTGAGTGAATATTCTTTGCAAGGTTTACGAACTCTTGTACTTGCCTCTAGGGATCTTTCAGATGCAGAACTTGAGGATTGGCAAAGCATGTATGAACATGCGAGCACTTCATTGACTGACCGAGCTTCAAAATTACGTCAAACAGCAGCTCTTTTAGAATGCAACCTAAAGTTACTGGGAGCAACTGGAATTGAGGACAAGCTTCAAGAGGGTGTACCGGAAACAATTGAGTCCCTTCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACTGCAATTTCAATTGGCCTTTCCTGCAAACTTCTGAGTGCAGATATGCAGCTGATAATTATAAATGGCACTTCAGAGGTTGAATGCAGAAATCTCTTGGCTGAAGCTAAAGCTAAAGCCAAATATGGTGTGAGATCTTCAAGTAGAGGACATCAGAATCCAGGTGATCCTGATATTCCCTATGATACGAAATCATTGAGCATGCCCAAGTGGAATCCAGGAAAGGAAGAAGGGACTACTGCTCCCTTGGCACTCATAATTGATGGAACTAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAATTTCCTGTACGGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAAGCAGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACATTGGCTATAGGTGATGGGGCCAACGATGTTTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGACGCCAAGCAGTGATGGCATCAGATTTTGCAATGGGACAATTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGACACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAACGCTGTCTTTGTGTTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCAGCATTGACAGATTGGAGTAGTGTATTCTATTCGGTGATATACACATCTATCCCCACTATCATTGTTGGTATTCTGGACAAAGACTTGAGTCGTAGGACACTGTTGCAGTATCCAAAACTCTATTGTGCGGGTCACCGGCAAGAGGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACGCTATGGCAGAGCCTTGTGCTCTTCTACATTCCCCTATTCACCTACAAGGACAGCTCAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTTCAGTTGTTATCCTCGTAAATATACACCTGGCTATGGACATTAACAATGGGATATTAATCATTCATGTTGCTGTGTGGGGATCAATAATCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCCAACTACTGGACTATTTATCATTTGGCAAGGTCCCCTACATATTGGATAACAATTTTGCTTATAACAATTGTGGCATTGCTCCCTCGCTTTACTTGCAAAGTTGTTTATCAAATTTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGGCAATGAGAAAACAACATGATAATTTGCAGTCAAGGCAACAAGTTTCCAGTTAA 3531 0.4186 MESNTPTNTVPFEISSSSASASASASRVQRIRHKSVQFDDNILLHDDNARQIYINDPIKTNHKYEFTGNEIRTSKYTIFTFLPKNLFIQFHRLAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDAYEDWRRHRSDRNENNRESLVLQSGQFQPKRWMKLQAGDVVKIFADEMIPADMVLLGTSDPSGLAYIQTMNLDGESNLKTRYAKQETASSVSSEACDVSGVIRCEQPNRNVYEFTANVEFNGYKFPLNQSNIVLRGCVLKNTEWIIGVVVYAGQETKAMLNSAASPSKRSKLESYMNRETLWLSVFLFIMCSVVALGMGLWLVRHKNQLDTLPYYRKTYFNGPDNGKKYKYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYCANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLLMANDSTAGAAVNCNRRWKLKSEIAVDSELMALLQKGSNGDERIAAHEFFLTLAACNTVIPILSGSCGASESNEDVDCIDYQGESPDEIALVSAASAYGYTLFERTSGHIVIDIHGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNFVKVLVKGADSSMFSILANDSASNDSVRHETHSHLSEYSLQGLRTLVLASRDLSDAELEDWQSMYEHASTSLTDRASKLRQTAALLECNLKLLGATGIEDKLQEGVPETIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQLIIINGTSEVECRNLLAEAKAKAKYGVRSSSRGHQNPGDPDIPYDTKSLSMPKWNPGKEEGTTAPLALIIDGTSLVYILEKELESELFDLAISCTVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGILDKDLSRRTLLQYPKLYCAGHRQEAYNMQLFWITMIDTLWQSLVLFYIPLFTYKDSSIDIWSMGSLWTISVVILVNIHLAMDINNGILIIHVAVWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLITIVALLPRFTCKVVYQIFWPSDIQIAREAEAMRKQHDNLQSRQQVSS 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2963g00011 1176 FunFam Phospholipid-transporting ATPase 547 691 - -
Gabi2963g00011 1176 Gene3D - 549 679 IPR023299 GO:0000166
Gabi2963g00011 1176 FunFam Phospholipid-transporting ATPase 700 922 - -
Gabi2963g00011 1176 SUPERFAMILY HAD-like 425 926 IPR036412 -
Gabi2963g00011 1176 Gene3D - 124 295 - -
Gabi2963g00011 1176 NCBIfam HAD-IC family P-type ATPase 849 968 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2963g00011 1176 NCBIfam HAD-IC family P-type ATPase 371 461 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2963g00011 1176 NCBIfam HAD-IC family P-type ATPase 699 752 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2963g00011 1176 SFLD Haloacid Dehalogenase 422 933 - -
Gabi2963g00011 1176 Gene3D - 701 922 IPR023214 -
Gabi2963g00011 1176 SFLD p-type atpase 422 933 IPR044492 -
Gabi2963g00011 1176 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 444 717 IPR023299 GO:0000166
Gabi2963g00011 1176 Pfam E1-E2 ATPase 150 396 - -
Gabi2963g00011 1176 PRINTS P-type cation-transporting ATPase superfamily signature 438 452 - -
Gabi2963g00011 1176 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Gabi2963g00011 1176 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1163 - -
Gabi2963g00011 1176 ProSitePatterns E1-E2 ATPases phosphorylation site. 440 446 IPR018303 -
Gabi2963g00011 1176 NCBIfam phospholipid-translocating P-type ATPase 66 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi2963g00011 1176 CDD P-type_ATPase_APLT_Dnf-like 68 1042 - -
Gabi2963g00011 1176 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1149 IPR023298 -
Gabi2963g00011 1176 Pfam Cation transport ATPase (P-type) 539 625 - -
Gabi2963g00011 1176 Pfam Phospholipid-translocating ATPase N-terminal 52 117 IPR032631 -
Gabi2963g00011 1176 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1150 IPR032630 -
Gabi2963g00011 1176 SUPERFAMILY Calcium ATPase, transduction domain A 149 291 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2963g00011 Gabi-Chr2963 144642 153137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2963g00011 29 1161 Primary Pumps ATPases AT5G04930 56.491 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2963g00011 K14802 - gmx:100788740 1981.84