Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2963g00010 ATGAATGTGAATGTGATAGCTTCTCCTCTCCCCTCAACTGCAACTACTAAACTTCAACATAATCACATGGCATTATGCTTCTCTCCCTTGAAACCCACCACCCCATATAATGTTTCTTTCTTAACAAACCGTTTCAAGAGCAACTCTCCAAAATGTAATGCTTTTTTTGATAACGTGACCAAAGGTTTGTTGGAGAACAGTGTTAATCTGGACCAGTTTCCTGTTCTCCAATCAGGATTTGTGCAATTTCAGAGAGTAACTGAAGACTTATCAGAGATTCAGAAGTGGGGGTTTCTCATATTTGGTGGGTTAACATGGATATACTTAACTGCAAGACCAGGTGTTCTTATTGGTGCCATTGATGCATACCTTCTGGCTCCTCTTCAACTTGGTTTGGACAGTTTATCTGGAAGGAGAAACTTGAAGGGGAGTGATTTTGTGGTTGGAGATAAGCTTGGTGAAGGGTCATTTGGTGTTGTTTATTCTGGTGTTTTTGTCCCAAAGAATGTGGATGTAGAAGAGAGGGTGCAGAAGAGGGGAAAAGGCAAGGCAATAAAGTTGGATGTGAAATCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATCCAAGGGGCTAAAGAATTTGGTGATTTTGAGGAATGGTTCAATTACAGGCTATCTAGAGCAGCACCTGAAACATGTGCTGAATTCCTTGGAAGTTTTGTAGCTGATAAAACAAATTCACAGTTCACTAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGTACTCTTGCTGACTACATGAAAGATCGCAACTTTCCTTCAAACCTAGAATTTGTCATGTTTGGACGTGTCTTGCAAGATGTAGACTCTTCTAAACGAAATGCATTAATCATCAAGCAAATAATGCGCCAGATCATTAGGTCTCTTAAGAAAATTCATGATACAGGCATTGTTCACAGAGATGTAAAGCCAGCCAACTTAGTGGTTACTAAACGGGGGCAGATTAAACTCATTGATTTTGGCGCAGCAGCAGACCTGCGGATTGGAAAGAATTATGTTCCGAACCTTGCCCTTTTGGATCCTGACTACCGCCCCCCAGAATTGTATGTACTCCCAGAAGAAACACCAAGTCCTCCACCAGAGCCAATTGCTGCTTTCCTTTCACCAATCCTTTGGCAGTTAAACAGCCCTGATCTATTTGATATGTATTCGGCTGGGATTGTACTCCTGCAAATGGCAATACCAACCTTGAGGTCTCCTTCTGCTTTGAAGAATTTCAATTTGGAAATAAAAACCTGTGGATATGATTTGAAAAAATGGAGGGACTATACTCGTCTCAGGCCAGACTTCCAGATTCTTGATAGTGAATCTGGTAGAGGGTGGGACTTAGCAACGAAGCTTATCTCTGAGAGAGGGTCCCTTAGAAGAGGACGTTTATCTGCTGCTGCTGCTTTGAGACATCCTTATTTTCTTCTGGGTGGTGATCAGGCAGCTGCAGTTCTTTCAAAATTAAGCTTAAGTAGAAAGTGA 1527 0.4139 MNVNVIASPLPSTATTKLQHNHMALCFSPLKPTTPYNVSFLTNRFKSNSPKCNAFFDNVTKGLLENSVNLDQFPVLQSGFVQFQRVTEDLSEIQKWGFLIFGGLTWIYLTARPGVLIGAIDAYLLAPLQLGLDSLSGRRNLKGSDFVVGDKLGEGSFGVVYSGVFVPKNVDVEERVQKRGKGKAIKLDVKSKDKVILKKVKVGIQGAKEFGDFEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEGDRTLADYMKDRNFPSNLEFVMFGRVLQDVDSSKRNALIIKQIMRQIIRSLKKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAAADLRIGKNYVPNLALLDPDYRPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPSALKNFNLEIKTCGYDLKKWRDYTRLRPDFQILDSESGRGWDLATKLISERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSRK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2963g00010 508 SUPERFAMILY Protein kinase-like (PK-like) 142 490 IPR011009 -
Gabi2963g00010 508 Pfam Protein kinase domain 293 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2963g00010 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Gabi2963g00010 508 Gene3D Transferase(Phosphotransferase) domain 1 285 491 - -
Gabi2963g00010 508 SMART serkin_6 146 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2963g00010 508 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 58 508 - -
Gabi2963g00010 508 Gene3D Phosphorylase Kinase; domain 1 132 256 - -
Gabi2963g00010 508 ProSiteProfiles Protein kinase domain profile. 146 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2963g00010 Gabi-Chr2963 116359 120025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2963g00010 290 361 MAP Kinase Kinase Gene Family AT1G18350 37.975 2.82e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Gabi2963g00010 Pkinase 8.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2963g00010 - - qsa:O6P43_016456 773.852