Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi295g00003 ATGTTTTTGTTCATGAATCCGTGTGCCAAGCCAACCCCCGTTGATGGGGATGAAGATGACCGTGGGAACGGCACGCCGAACACAAAAGAAGCCGTCAAGGGTCTGACGTCGCAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGCTGGCAACCCCAAGAGCATCAAGTATGACACCGTTTCTGAAGAGGGGGTTCCATACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCTAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGATGGTGGACATGACTGGATCCAACAAGTGGATAGCAAAGATGGAGCCAGGTGCTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGGTATGTATAA 462 0.5087 MFLFMNPCAKPTPVDGDEDDRGNGTPNTKEAVKGLTSQIKDLALKLSGKKIKAGNPKSIKYDTVSEEGVPYGYIGGGSASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVAMVDMTGSNKWIAKMEPGAHITVVSLPTGGNDLKRIRFWYV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi295g00003 153 Pfam Transcription factor regulating root and shoot growth via Pin3 121 150 IPR013591 -
Gabi295g00003 153 Pfam Transcription factor BRX N-terminal domain 25 48 IPR027988 -
Gabi295g00003 153 MobiDBLite consensus disorder prediction 1 31 - -
Gabi295g00003 153 MobiDBLite consensus disorder prediction 82 105 - -
Gabi295g00003 153 ProSiteProfiles BRX domain profile. 121 153 IPR013591 -
Gabi295g00003 153 MobiDBLite consensus disorder prediction 82 110 - -
Gabi295g00003 153 PANTHER PROTEIN BREVIS RADIX-LIKE 1 16 150 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi295g00003 Gabi-Chr295 102588 103597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi295g00003 5 150 Major Intrinsic Protein MIP AT1G31880 46.471 2.46e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi295g00003 - - rcu:8280074 135.961