Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2935g00036 ATGAAGAGGAAAAGCCAAAATAGGATTGGGAAGAAGGAGAGGAGAAAGATGAAGGGCGCGCTTTGTAACAGCACCACCAGACAGTTGCAGCTTCAGCTTGGTCAAGTCTCACTCATTCCTCTCCATCCTAAATCTTCTACTTCTTCAGCCGTTTCACGCTTCCAGAACCTTCTCGATGCCAAACCCAATGACGCCTCTTCCTCTCGCGTTACGGTTCCCGACGACGCTGCCACCGTCGACGCTGACAGAGATTTCATTCTCAGTCAGGACTTCTTTTGCACCCCGGATTACATAACCCCAGATAATCAGAATATTTTGAATGGCTTCAATTGCAACATGGAAAATACCCCTTGCCCCAAATCACCGGAGAAGCTGAACACTACGAAAAGCAAGAGATGCCGTCTGGATGCTATCTCAGTAAACCCTCTCAGCCCTACCTTTTCTAGTGACCATCAACAAATTGTGGAACTTGGAAAGGAGACTATTGCTGAGGAAGTAGCTGTTGAGAAAACAATATCAGCTGGTAAACTAAAGGCACAAAATTATATTTCACATTCAGCAGTTGCATTGCGTTGTAGGGTTATGCCTCCTCCTTGCATTAGGAACCCCTATTTGAAAGACGTTTCAGAAAAGGAGGCAGATCCCTTTGGAAACCAAAGATCAAAATGTGCAGGCCTTTTTCCTGCATTTACTGGTGGTGATGGGCTTTCACGCTATCGCACTGACTTTCACGAGATTGAGCAAATTGGTCAAGGGAACTTTAGTAGAGTTTTCAAAGTATTAAAACGGATAGATGGTTGCTTGTATGCTGTGAAACACAGCACCAGACAGTTATGCCAGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCTTTGGCAGCCTTAGGTTCCCATGAGAACATTGTGGGGTACTATTCTTCATGGTTTGAAAATGAACAGCTGTACATTCAGATGGAGCTATGTGATCACAGCTTATCCATAAAAAACTGCTCTACATTATTTTCGGAAGTACTAGTGTTAGAAGCTTTATATCAGGTTGCCAATGCACTGCGATTTATACACGAGAAGGGAATAGCTCATCTAGATGTTAAACCTGATAATATCTATGTCAAGAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTTCTTGATAGTAGCCTGCCAATTGAGGAGGGCGACGCCCGTTATATGCCACAGGAAATCCTTAATGAGAATTACGATCACCTTGATAAGGTTGATATTTTCTCCTTGGGAGCCTCTATTTATGAACTCATTCGCAGATTGCCTTTGTCAGAATCTGGATGTCAATTTTTTAATCTTAAAGAGGGCAAGTTGCCACTCCTGCCTGGTCATTCAATGCAATTGCAAAACTTGCTCAAGGTCATGATAGACCCTGATCCGGTTAAGCGGCCTTCTGCTAAAGAATTAGTAGAGAACCCAATTTTTGGCAGAGCCCAAAGAACAGCCAAAATGTGA 1491 0.4313 MKRKSQNRIGKKERRKMKGALCNSTTRQLQLQLGQVSLIPLHPKSSTSSAVSRFQNLLDAKPNDASSSRVTVPDDAATVDADRDFILSQDFFCTPDYITPDNQNILNGFNCNMENTPCPKSPEKLNTTKSKRCRLDAISVNPLSPTFSSDHQQIVELGKETIAEEVAVEKTISAGKLKAQNYISHSAVALRCRVMPPPCIRNPYLKDVSEKEADPFGNQRSKCAGLFPAFTGGDGLSRYRTDFHEIEQIGQGNFSRVFKVLKRIDGCLYAVKHSTRQLCQETERRKALMEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDHSLSIKNCSTLFSEVLVLEALYQVANALRFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDSSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIYELIRRLPLSESGCQFFNLKEGKLPLLPGHSMQLQNLLKVMIDPDPVKRPSAKELVENPIFGRAQRTAKM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2935g00036 496 ProSiteProfiles Protein kinase domain profile. 243 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2935g00036 496 SMART serkin_6 243 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2935g00036 496 Gene3D Transferase(Phosphotransferase) domain 1 322 490 - -
Gabi2935g00036 496 FunFam WEE protein kinase 233 321 - -
Gabi2935g00036 496 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 92 491 - -
Gabi2935g00036 496 FunFam Wee1-like protein kinase 322 491 - -
Gabi2935g00036 496 ProSitePatterns Protein kinases ATP-binding region signature. 249 272 IPR017441 GO:0005524
Gabi2935g00036 496 Gene3D Phosphorylase Kinase; domain 1 234 321 - -
Gabi2935g00036 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Gabi2935g00036 496 Pfam Protein kinase domain 243 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2935g00036 496 SUPERFAMILY Protein kinase-like (PK-like) 236 488 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2935g00036 Gabi-Chr2935 295736 299278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2935g00036 2 489 Core Cell Cycle Gene Families AT1G02970 60.852 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Gabi2935g00036 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2935g00036 K06632 - gmx:547742 815.453