Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2935g00024 ATGAAAATGGTGGAGAGGAGAAAGCCTCTAGTACTATGTTCCACCAAACATGTGATCAATTCCTTATTGAGCTCTTCTTCCACTTGGTCAAGCAACAACCTCTTCTTCCATGACCATGACCATGACCATGACCATGGCCATGATGATGAATGTTTGCCCAATTTCCACTTACCTGTTGGCATTCTTCGATTCTCCAACCTCGAAAATCAACCCCAATTCCTTTCTCTTGACCATTCTGCGCTCCTTGGCCTCTCCACTTCTCTTCTCAAAAGGCTTTCCATTACTTCAGGTTCACTGGTTCTGGTCAAGAATGCTGAGATTAACATACAGAGAATTGCAGTTGCCATTGCTCTTGATCCTCCACGTACCACCCCTGATACTGAATCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCGAATTATGCTTGTATTTCCTTCTTGTGATTTCCCTCGTAGTGGCCCGTTGTTGTTAGATGATGAATTTGCTTATTTATCTCCACTTTTAGCCTTTAATCTTAACTTGCACATGACATGCTTAAAATCCATTCTACACCATGGCGAAGACGCTTTAGCGTCTTATTTCAAATCCCAAGGGGGTGACTGTGATGAAGACACTGCTAAAAGCGTTAACGATTCTGTCATCAACGTTGAATTGGCACCTCTTGCTCAACCTCCAAGGTTTGCCTCACTTCTGAGGGTTTCTTTTGTTAAGATACCAGAATGTGGCATCCTTGAATCTATTAGAGCAAGTTCACCTGTTGAATCTGAAGAACGTCAAGACATGATTGATTTGGCATTGCAAATGTACTTTGAGGTCGATAGGTATTTGTCAAGGGGAGATGTTTTTGGAATTAACATAAATTGGAAATGCAATTCCACTATTTGCATTCCATGCAGCCAAAAATCACAAAAGAAAAATGACAACCTTGTCTGTTTCAAGGTATGTTTACCTCTCTCTTTTTTTTTCCTAAACCTCAAAAAAATGTCAAGTTCTTTGTTAGAATGTAACTTATATCTTCAGGTCATTGCTATGGAACCATCAGATGAACCAGTTGTTCGTGTCAATAGAACCTTAACTGCTCTGGTCCTAGTAGGGAGTGCCCCATCCGCACTTCCTCCGGATTTGTTAATTGCTGGACCAGAAGGGCCTGTGCCTTTGCAAGGAGACACAGTAAAGATATTGGCTTCGATACTTACACCAACTTTCTGTCCATCAGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAAAGGACTGTCGTTAGATATGTTGCTCGTCGACTGGGCCTGCATGTGGTGGAATATAACTGTCATGATCTAATGATGGCTGATAGAACATCTGTTGCTCTAGCTCAAGCTTTCAAGACGGCTCAAAGATACTCGCCGACAGTACTTCTTCTACGTCATTTTGATGTTTTTCGAGATTTCCATTCGCTTGAAGGTTCACTAAATGATCAAAGAGGCAATACATCTGAAGTTGCATCAGTTATTAGGAAATTCACTGAGCCAATTTGTGAACATGGTGATGGTAACTCCCTGGGAAAATCAAACGGTGAATTTGTGGAGAAGAATGCTGAAAAGACAAGTGGTCATCAGGTCCTGTTGATTGCTGCTGCTGACAGTTCAGAAGGTCTACCTTCAACTATCAGACGCTGCTTTAGCCATGAAATAAGCATGGGGCCTTTGACTGAAGAACAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCTGATCTACTCTCTAATACTAATTCAGAGGGTCTTGTAAAAGAAATAGTTGGACAGACATCTGGTTTCATGCCTAGGGATATGTGTGCCTTAATTGCTGATGCTGGTGCAAACTTATTTCCCAGGAGAAATGTTGAAGCAGACAAAGATGGACCTGATGATGTAGATGGTTCTCTAATTTCCAAGGTGACGGAGGACAACAATCACTTGAAATTCTCACCTCATATTCCTGGGAAAGAAGACTTAATGAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGCACTCCAAAGGTTCCAAATGTGAAATGGGAAGACGTTGGTGGGCTTGAAGATGTCAAAAAATCAATCCTGGATACTGTTCAGTTACCTCTCCTGCATAAAGATCTGTTTTCAGCTGGATTACGTAAGCGGTCTGGTGTTCTTTTGTATGGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACAGAATGTTCCTTAAATTTTCTTAGTGTAAAAGGTCCTGAACTGATCAACATGTACATAGGAGAGTCCGAGAAGAATGTTAGAGAAATTTTCCAGAAGGCCAGATCTGCGCGTCCATGTGTCATCTTCTTTGATGAGCTTGATTCTCTTGCACCAGCTCGGGGTGCTTCTGGAGATTCTGGGGGGGTAATGGACAGAGTGGTTTCTCAGATGCTTGCGGAGATTGACGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAAGTAATAGACCAGATTTGATAGACCCAGCACTTTTGCGCCCTGGTCGATTTGATAAACTGCTATACGTTGGAGTTAACTCTGATGCATCTTACAGGGAGCGGGTCCTGAAAGCTCTTACCCGAAAGTTTAAATTGCATGAAGATGTTTCACTTTACTCTATAGCAAAAAAATGTCCACCAAACTTCACTGGTGCAGACATGTATGCCTTGTGTGCTGATGCTTGGTTCCATGCTGCAAAGCGCAAGGTTTTGAGTGCAAATCCAGAGTCTACCAGCCAAGATAATGAAGCAGATTCTGTTGTTGTTGAATACAATGATTTTGTGCAGGTCTTGGGAGAGCTGCCACCTTCCCTCTCCATGGCTGAGCTTAAGAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACCTCTAAATGA 2946 0.4209 MKMVERRKPLVLCSTKHVINSLLSSSSTWSSNNLFFHDHDHDHDHGHDDECLPNFHLPVGILRFSNLENQPQFLSLDHSALLGLSTSLLKRLSITSGSLVLVKNAEINIQRIAVAIALDPPRTTPDTESPSSSSSSSSSSSSSRIMLVFPSCDFPRSGPLLLDDEFAYLSPLLAFNLNLHMTCLKSILHHGEDALASYFKSQGGDCDEDTAKSVNDSVINVELAPLAQPPRFASLLRVSFVKIPECGILESIRASSPVESEERQDMIDLALQMYFEVDRYLSRGDVFGININWKCNSTICIPCSQKSQKKNDNLVCFKVCLPLSFFFLNLKKMSSSLLECNLYLQVIAMEPSDEPVVRVNRTLTALVLVGSAPSALPPDLLIAGPEGPVPLQGDTVKILASILTPTFCPSVLSSKFRVSVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMMADRTSVALAQAFKTAQRYSPTVLLLRHFDVFRDFHSLEGSLNDQRGNTSEVASVIRKFTEPICEHGDGNSLGKSNGEFVEKNAEKTSGHQVLLIAAADSSEGLPSTIRRCFSHEISMGPLTEEQRAEMLFQSLQSVSDLLSNTNSEGLVKEIVGQTSGFMPRDMCALIADAGANLFPRRNVEADKDGPDDVDGSLISKVTEDNNHLKFSPHIPGKEDLMNALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSAGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVREIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSANPESTSQDNEADSVVVEYNDFVQVLGELPPSLSMAELKKYEQLRDQFEGTSK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2935g00024 981 FunFam Peroxisome biogenesis protein 6 389 573 - -
Gabi2935g00024 981 FunFam Peroxisome biogenesis protein 6 869 955 - -
Gabi2935g00024 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 631 IPR027417 -
Gabi2935g00024 981 Gene3D - 396 596 IPR027417 -
Gabi2935g00024 981 ProSitePatterns AAA-protein family signature. 838 856 IPR003960 GO:0005524|GO:0016887
Gabi2935g00024 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 975 IPR027417 -
Gabi2935g00024 981 SMART AAA_5 731 871 IPR003593 GO:0016887
Gabi2935g00024 981 SMART AAA_5 416 576 IPR003593 GO:0016887
Gabi2935g00024 981 FunFam Peroxisomal biogenesis factor 6 693 882 - -
Gabi2935g00024 981 CDD RecA-like_PEX6_r2 707 866 IPR047533 -
Gabi2935g00024 981 Gene3D - 693 970 IPR027417 -
Gabi2935g00024 981 PANTHER AAA-FAMILY ATPASE 76 978 - -
Gabi2935g00024 981 MobiDBLite consensus disorder prediction 120 141 - -
Gabi2935g00024 981 Pfam ATPase family associated with various cellular activities (AAA) 735 867 IPR003959 GO:0005524|GO:0016887
Gabi2935g00024 981 Pfam ATPase family associated with various cellular activities (AAA) 420 571 IPR003959 GO:0005524|GO:0016887
Gabi2935g00024 981 MobiDBLite consensus disorder prediction 124 141 - -
Gabi2935g00024 981 Gene3D - 869 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2935g00024 Gabi-Chr2935 164564 171512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2935g00024 701 924 Calmodulin-binding Proteins AT3G56690 40.444 1.76e-40 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2935g00024 K13339 - gmx:100820183 1496.1