Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2931g00037 ATGGATAACGACGAATCCACACGCAAGATCAACGACTTCGATGCAAGAGGATACAGTCTCAGTGGCAAGATCATGCTCTCCGCTATCATCCTTCTCTTCTTCATCGTTCTTCTAATGCTTTTCCTTCATTTATACGCTCGCTGGTACCTCCTCCGCGCTCGCCGACGCCACCTCCGCAACCGCCGTCTCCGCCGTACCGAACTCGTCGTCTACCATGACTCCGACAACCCCGCCGCCGCACGCGGCCTCGACGCCTCCCTCATCGCCTCGCTCCCTGTCTTCTCCTACGACCCAACCACCCAACAGGAAAACCCGCCGGAATGCGCCGTCTGCTTGTCGGAGTTCGAGGCTGGTGAAACGGGTCGGGTCTTGCCCAAGTGTAATCACAGTTTCCATACCGAATGTATTGACATGTGGTTTCACTCTCACTCCACCTGTCCTCTCTGTCGTGCTACGGTTGACCCGCCACAGACCCGATCCGATTTGTTTATAACTGTGTGCGAACCGGAACCCGGTTCGGGTTCGGGATTGTGCTTGGAAGATGAGAACCGAGCCGGGCGAGAGGTTTCTTCGTCGTCGGTTGGGTTGAGGAGGAAGCCGTCGTTTGTAAGGGTGACCGTTGAGGTGCCGGCGAGGAACGAGAGTTTCCGGGACGCGAGGAACGAGAGTTTCCGGGACGAGTCGGATTGCGACTCGCCGTCGACTCAGTCATCGTTTCGGTCGCCGATGAGTCGGATGATGTCGTTCAAGAGAATCCTTAGCAGGGAACGTAAGGGAAGCGTTTCTCCGTCGTCGTCGGGTGGTGGTGGTTGCAGCTCCGCTGCCGAGTTTAGCACGGAACAAGGTGGACGAGACGAAACTCAGTGA 867 0.5698 MDNDESTRKINDFDARGYSLSGKIMLSAIILLFFIVLLMLFLHLYARWYLLRARRRHLRNRRLRRTELVVYHDSDNPAAARGLDASLIASLPVFSYDPTTQQENPPECAVCLSEFEAGETGRVLPKCNHSFHTECIDMWFHSHSTCPLCRATVDPPQTRSDLFITVCEPEPGSGSGLCLEDENRAGREVSSSSVGLRRKPSFVRVTVEVPARNESFRDARNESFRDESDCDSPSTQSSFRSPMSRMMSFKRILSRERKGSVSPSSSGGGGCSSAAEFSTEQGGRDETQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2931g00037 288 Pfam Ring finger domain 107 150 IPR001841 -
Gabi2931g00037 288 MobiDBLite consensus disorder prediction 230 244 - -
Gabi2931g00037 288 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 154 IPR044675 -
Gabi2931g00037 288 FunFam RING-H2 finger protein ATL3 74 155 - -
Gabi2931g00037 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 157 IPR013083 -
Gabi2931g00037 288 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Gabi2931g00037 288 CDD RING-H2_EL5-like 107 150 - -
Gabi2931g00037 288 MobiDBLite consensus disorder prediction 258 282 - -
Gabi2931g00037 288 MobiDBLite consensus disorder prediction 218 288 - -
Gabi2931g00037 288 SUPERFAMILY RING/U-box 88 156 - -
Gabi2931g00037 288 SMART ring_2 108 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2931g00037 Gabi-Chr2931 378899 380329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2931g00037 11 263 Rapid Response to Elicitors AT3G16720 49.451 2.82e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2931g00037 - - lja:Lj6g3v1468220.1 287.73