Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2931g00026 ATGTGTGGGGGTGCTATCATTTCCGACTTCATTGGTGTGAAGAAGCGTGGCCGGAGCCACGATGGTCAGGACCTGTGGTCTGAGCTTGACCCTTTCTCTGACCTCCTTGGGTTCGATGTCACCTCTGCTTCCAAAAACACACCACCACCGGTTCACTCCGATCAAAACTTCCCTCTAGTCACAGACATAAAAGTGGTGGCATCATGTGACAAGGTGGAGAAGAAAAGCGTGGGTGCTGAAAAGGGAAAGAAGAGTGGTAAGGTTCAGCGAGCTCGAAAGAACGTGTACAGAGGAATCAGACAAAGGCCATGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACATAAGGGTGTCCGTGTCTGGCTCGGCACCTTCAACACCGCCGAAGAAGCCGCCATAGCCTACGACGACGCCGCCAAGCGCATCCGTGGAGACAAGGCCAAGCTCAACTTTCCTGCCACCAACACCACCGCCACTCCTCCAACTCCGCCACCCTCGAAGAAGCGGTGCCTCAGCCCCGATCTTAGTGATCAAGCTAGCTCCAAACCCATTGAGCCACCGTCTTCAACAACCGTGCACGGCGGTGTCGTCGGCGGAGACGACGGCGGCGAGGAACTTGACCTGATGCAGCAAATCTCGAACCTTGAATGGTTCCTGGGCTTGGAGAATGATGAGCAGCAGCAGCAGCAGCCGCCGCTGCCTGGCGGAATCTGCGGCGGTGCTGAGTGGGACGACAATTTCGTGGACCTGTGGTCGCTTGACGACGTCGTTATGCCCAACCGTAACCTAGCTTACTAG 798 0.5652 MCGGAIISDFIGVKKRGRSHDGQDLWSELDPFSDLLGFDVTSASKNTPPPVHSDQNFPLVTDIKVVASCDKVEKKSVGAEKGKKSGKVQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAAIAYDDAAKRIRGDKAKLNFPATNTTATPPTPPPSKKRCLSPDLSDQASSKPIEPPSSTTVHGGVVGGDDGGEELDLMQQISNLEWFLGLENDEQQQQQPPLPGGICGGAEWDDNFVDLWSLDDVVMPNRNLAY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2931g00026 265 Gene3D AP2/ERF domain 95 154 IPR036955 GO:0003700|GO:0006355
Gabi2931g00026 265 SUPERFAMILY DNA-binding domain 95 153 IPR016177 GO:0003677
Gabi2931g00026 265 Pfam AP2 domain 95 144 IPR001471 GO:0003700|GO:0006355
Gabi2931g00026 265 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Gabi2931g00026 265 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Gabi2931g00026 265 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Gabi2931g00026 265 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Gabi2931g00026 265 CDD AP2 96 151 IPR001471 GO:0003700|GO:0006355
Gabi2931g00026 265 PANTHER DNA-BINDING DOMAIN 75 181 IPR044808 GO:0003700|GO:0009873
Gabi2931g00026 265 FunFam Ethylene-responsive transcription factor 2 94 153 - -
Gabi2931g00026 265 MobiDBLite consensus disorder prediction 173 188 - -
Gabi2931g00026 265 MobiDBLite consensus disorder prediction 151 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2931g00026 Gabi-Chr2931 221784 223644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2931g00026 1 257 AP2-EREBP Transcription Factor Family AT3G16770 42.705 1.45e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gabi2931g00026 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2931g00026 K09286 - gmx:100817253 263.462