Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2931g00023 ATGGCAACGGAGAAGTTAATGTCCGGCGGCGGCCCCCGCTACTTCCAAATGAAATCGGAGCCGCCGTCTTCGCCGCAGTCTCCGGCGGCGGCTGAGATGTCGTCGGTCCCGTCGTTCCGTCAAAGCTGCGCCGAGGTTAATCGGATTTTCGACGAATTGCCGAAAGCCACCATCGTCTCCGTTTCTCGTCCCGACGCCGGCGACATCAGCCCCATGCAACTCTCTTACACCATTCAGTTCCAGTACAAACAGTTCATGTGGGAGCTAGAGAAGAAAGCTCATCAAGTATTTATGTTGCATTTTACGTTAAAGAAACGTGTCTTTATTGAGGAAATTCACGAGAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACATACTTCTATGGTGCAAGATGATGATGAAGCTGACGATGAGACAGTTCCTTTACATACTGATGAAAGTGCTAAAGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTATACGGCCGGCCTTAGGAAGACAGCACTCTATTGCAGACAGGGCAAAGAGTGCGATGCAAGGGTATCTGAATCACTTTTTGGGAAATATCAATATTGTTAACTCTCGAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTTTCTCCTGAATATGGCCCTAAGCTCAAGGAAGAATATGTGATGGTGAAGCATCTGCCTAAAATTCTAAAGGATGATGATTCCAGAAAGTGTTGTATGTCTTCCTGTTTTAGTTGTTGCAATGACAACTGGCAAAAGGTATGGGCTGTATTGAAACCTGGATTCTTGGCGTTGCTGGCTGATCCTTTTGATACACAGCCCTTGGACATTATTGTTTTTGATGTACTACCTCCCTCAGATAGGAATGGGGATGGTCGTCTATCACTAGCAAGTGAAATGAAGGAACGAAATCCTTTACGCCATTCGTTCAAGGTGACTTGTGGAACCCGGAGCATTAGAATTAGAGTGAAAAGTACTGGTAAAGTTAAAGATTGGGTTGCTGGAATTAATGATGCTGGACTCAGGCCTCCTGAAGGCTGGTGTAATCCTCACCGCTATGGTTCTTTTGCTCCTCAGAGAGGCTTAATCGAAGATGGCAGTCAAGCCCAGTGGTTTGTAGATGGGCGAGCAGCGTTTGAGGCCATTGCTTCTTCAATTGAGGGTGCAAAATCTGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTCCACACTCATGCTTCATCAAGGCTTGATAATTTGTTGGAAGCAAAAGCTAAGCAAGGGGTTCAGATTTACATTTTGCTCTACAAAGAGGTGGCTATTGCTTTGAAAATCAACAGTGTTTATAGCAAGAGAAAGCTTGTTAGCATTCATGAGAATGTGAGAGTATTACGCTATCCTGACCACTTTTCTAGTGGCGTTTACCTGTGGTCGCACCATGAAAAACTTGTCATTGTTGATAACTATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACATCTGAGCATAAAGTGGGAGATTTCCCTCCTGTAATCTGGCCTGGGAAGGATTATTATAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGAACGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCATATGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGGAGAAGCACAGAGTTTCAGATTGAAAGCAAGAGCACTGACAATTATAGAGTCATCAAAAGAGAAGATTCATTTTCCTCATCTTCCCAAGACCAAGATATTCCTCTACTTTTGCCTCAGGAGCCAAGTGGGTTGGATACTCCTGAAGGAGACCCAAAATTGAATGGCTTAGGCTCCTTTTTACATCACCTTGACAAGCCAAAAAGGTTTAGCAGTGGTCTTCCATTCTCATTCGGGCGGAAGGCCAAAATTGTAGCTGTTGGTCCAGATACACCAATGAAGGGCTTTGTAGATGATCTTGACTCTCTGCATTATCATGAGAAAATGTCTTTGGATAGAGTGGCTCATGCTGATTTACAAAATACAGATCCAGAATGGTGGGAAACACAAGAACGGGGTGATCAGGTTGGCTTTGCTGATGAATCAGGACAAGTAGGTCCTCGTGCTTCTTGCCGTTGTCAGGTTATTAGGAGTGTAAGTCAGTGGTCTGCCGGAACAAGCCAAACTGAAGAGAGCATCCACAATGCTTATTGCTCTCTTATTGAGAAAGCTGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTCTCTGGAGATGAGATGATTCGGAATCGTGTGCTAGAAGCTTTATACCAACGGATTATGCGAGCTTACAAAGACAAAAAATCTTTCAGGGTTATAATTGTCATACCTCTCCTGCCTGGCTTCCAGGGGGGGCTTGATGATAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGGCAGAATTCTATCTTACATAATCTTTGTGAACTTCTTGGTTCAAGAATACATGACTACATCTCTTTTTATGGCCTGAGGTCTTATGGTAGACTCTCTGATGGTGGTCCTGTGGCAACCAGCCAGTAA 2760 0.4384 MATEKLMSGGGPRYFQMKSEPPSSPQSPAAAEMSSVPSFRQSCAEVNRIFDELPKATIVSVSRPDAGDISPMQLSYTIQFQYKQFMWELEKKAHQVFMLHFTLKKRVFIEEIHEKQEQVKEWLQNLGIGEHTSMVQDDDEADDETVPLHTDESAKDRDVPSSAALPIIRPALGRQHSIADRAKSAMQGYLNHFLGNINIVNSREVCKFLEVSKLSFSPEYGPKLKEEYVMVKHLPKILKDDDSRKCCMSSCFSCCNDNWQKVWAVLKPGFLALLADPFDTQPLDIIVFDVLPPSDRNGDGRLSLASEMKERNPLRHSFKVTCGTRSIRIRVKSTGKVKDWVAGINDAGLRPPEGWCNPHRYGSFAPQRGLIEDGSQAQWFVDGRAAFEAIASSIEGAKSEIFICGWWLCPELYLRRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVAIALKINSVYSKRKLVSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDNYICFIGGLDLCFGRYDTSEHKVGDFPPVIWPGKDYYNPRESEPNSWEDTMKDELEREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRSTEFQIESKSTDNYRVIKREDSFSSSSQDQDIPLLLPQEPSGLDTPEGDPKLNGLGSFLHHLDKPKRFSSGLPFSFGRKAKIVAVGPDTPMKGFVDDLDSLHYHEKMSLDRVAHADLQNTDPEWWETQERGDQVGFADESGQVGPRASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSGDEMIRNRVLEALYQRIMRAYKDKKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLCELLGSRIHDYISFYGLRSYGRLSDGGPVATSQ 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2931g00023 919 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 484 511 IPR001736 GO:0003824
Gabi2931g00023 919 SUPERFAMILY PH domain-like 255 347 - -
Gabi2931g00023 919 MobiDBLite consensus disorder prediction 136 156 - -
Gabi2931g00023 919 PIRSF PLD_euk 16 616 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gabi2931g00023 919 PIRSF PLD_euk 611 919 IPR016555 GO:0004630|GO:0006654|GO:0048017
Gabi2931g00023 919 CDD PLDc_vPLD1_2_yPLD_like_2 778 919 - -
Gabi2931g00023 919 MobiDBLite consensus disorder prediction 19 34 - -
Gabi2931g00023 919 MobiDBLite consensus disorder prediction 636 665 - -
Gabi2931g00023 919 SUPERFAMILY Phospholipase D/nuclease 758 906 - -
Gabi2931g00023 919 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2931g00023 919 CDD PH_PLD 200 347 - -
Gabi2931g00023 919 Gene3D Endonuclease Chain A 370 608 - -
Gabi2931g00023 919 Pfam Phospholipase D Active site motif 484 511 IPR001736 GO:0003824
Gabi2931g00023 919 PANTHER PHOSPHOLIPASE D 143 909 IPR015679 -
Gabi2931g00023 919 SMART pld_4 484 511 IPR001736 GO:0003824
Gabi2931g00023 919 SUPERFAMILY Phospholipase D/nuclease 343 604 - -
Gabi2931g00023 919 Gene3D Endonuclease Chain A 741 917 - -
Gabi2931g00023 919 CDD PLDc_vPLD1_2_yPLD_like_1 377 521 - -
Gabi2931g00023 919 Gene3D - 250 349 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2931g00023 Gabi-Chr2931 167768 183839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2931g00023 1 919 Phospholipase D Gene Family (Wang group) AT3G16785 72.944 0.0 1298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2931g00023 K01115 - gmx:100780514 1707.19