Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2931g00021 ATGGTTCTTTTTCCATTTCTTGTCAATGGATCGGGGAGAACAGTGTCGTTGAAGAAAGAGAAGAGTTGTAGAAAGGATGATGGAAGGAAAGCTGTGGAAGCATTGGCAAAGGAAGCAAAGAAGAATGAATTGTTATTGAGTTCATCTGGAATTGTTAAGTCTGCCAAGGCCAACGATTTTGCTTGTTTGTTCACTAAGAAGGGCCAGAAAGGAGTGAATCAAGATTGCCTTCTTGTTTGGGAGGAATTTGGTTGCCAAGAAGACATGACCTTCTGTGGAATTTTTGATGGTCATGGACCTTGGGGAAACTTCGTTGCCAAAAGGGTCAGGAAACTATTACCTGCTTCTTTGTTATGCAATTGGCAGGAAAATCTGGCTGCAACATCACTTGACCTAGATTTTAAGATGGAATCAGACAGAAACTTCCATAAATTTAACACATGGAAGCAGTCCTACATAAAGACTTTTGCTGCCATTGATCATGATCTGAAGCAGCATACTGGAATTGATTCTTTTCAAAGCGGTACTACAGCTTTGACAATTATCAAACAGGCTGAACATCTCATTATAGCAAACGTTGGTGATTGTAGGGCTGTCTTGGCAACCACTTCAGAGGATGGTATATTGACTCCACTTCAGCTTACCACTGACTTCAAGCCAAGCTTACCAAAGGAGGCAGAGCGCATAACACAATCCAAAGGGCGGGTATTTTGTTTAGAAGATGAACCAGGAGTGTATAGGGTGTGGATGCCAAATGGTAAGACTCCAGGACTAGCAATATCAAGAGCATTTGGTGACTACTGTGTGAAGGACTTTGGACTAATCTCTGTGCCAGATGTGACACAAAGAAAACTTACCACCAGGGATCAATTTGTTATCTTGGCAACAGATGGGGTATGGGACGTTATTTCCAACCAAGAAGCAGTGAAAATTGTTGCTTCAACACCACATAAAGAAAAAGCAGCTCAGAGGCTTGTGAAATGCGCCATGCATGAATGGAAACGTAAGAGAAGAGGCATTGCTATTGATGATATATCAGCTATTTGCCTCTTTTTTCACTCTCCCTCCACTCATCAACTCCCTACAACCAAAGTTGTCAAATAA 1104 0.4167 MVLFPFLVNGSGRTVSLKKEKSCRKDDGRKAVEALAKEAKKNELLLSSSGIVKSAKANDFACLFTKKGQKGVNQDCLLVWEEFGCQEDMTFCGIFDGHGPWGNFVAKRVRKLLPASLLCNWQENLAATSLDLDFKMESDRNFHKFNTWKQSYIKTFAAIDHDLKQHTGIDSFQSGTTALTIIKQAEHLIIANVGDCRAVLATTSEDGILTPLQLTTDFKPSLPKEAERITQSKGRVFCLEDEPGVYRVWMPNGKTPGLAISRAFGDYCVKDFGLISVPDVTQRKLTTRDQFVILATDGVWDVISNQEAVKIVASTPHKEKAAQRLVKCAMHEWKRKRRGIAIDDISAICLFFHSPSTHQLPTTKVVK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2931g00021 367 FunFam Probable protein phosphatase 2C 34 51 354 - -
Gabi2931g00021 367 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Gabi2931g00021 367 CDD PP2Cc 60 352 IPR001932 -
Gabi2931g00021 367 SMART PP2C_4 51 350 IPR001932 -
Gabi2931g00021 367 SUPERFAMILY PP2C-like 60 354 IPR036457 -
Gabi2931g00021 367 Pfam Protein phosphatase 2C 134 330 IPR001932 -
Gabi2931g00021 367 Gene3D - 48 354 IPR036457 -
Gabi2931g00021 367 PANTHER PROTEIN PHOSPHATASE 61 350 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2931g00021 Gabi-Chr2931 159116 161571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2931g00021 1 353 PP2C-type Phosphatase Gene Family AT3G05640 58.873 1.94e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2931g00021 - - gmx:100814087 610.527