Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2931g00017 ATGTTGAAGAAGCAGTTGAAGAAGTTAGGCTATACAACTTCGCGGTTAGATTTTGATGCTGGTTTGGAAAAATTTAAAGAAACAAGCCCACAAATTGCAGCATGGATTGATCGTATTCTGAAGGAGAAGTGGAGTATTGCTTATGATGCTGAAGGAAGACGATTTGGCCACATGACTACAAACCTGTCAGAGTGTGTGAACAAGGTCCTTAAAGATTTCGTTCCTCTTCATTCTATAACTTATCACCAACCCTTCAATGTACTTTTCCCTTCTTTATGCACAAACGCTTCTTCTTCATACATCATCATCAATCTTGTTTTCTCACCCGATTCTTCTCTCGAAGCTTCCAAAGGAGCTCGTTTCGACGCCTCCCAGAAGCCCGATTCAGTTTTTGACTTGTTCAGAAAATGGGGTTTCTCAAAACCCCACTTGGATCATATCATTACAAGGGAGTCATGGTTAATTTCTTGCAACCTCAACAAAAGGGTTGTGCCAAAGTTTCAATTTTTACTCTTCAAAGGTGCTTCTTCCTCTGACATTGTTTTCATAATAACCAAGACACCGAGACTCCTCCGCCGAAGCCATGAGAATCATATAGTCCCTACATATGAATTGATGCTTAGATTCTTACCATCTGATAAAGGAGACCTTGGCTTTATATTCTCATCAACTCAATTGCTCAAGCGGGTGGAGAAATTAAAGGAATTGGGGTTTAACCCTTCAACTTCAAAGTCAGCTTTTAGTGGTGCATTGCTTGCCAAACATACTGTCAAAGAATCCAAGTGGGATGAGAAAGTTGATGTCTTTAAGAAGTGGGGTTGGTCTGATGAAAACATTCATGAAGCATTTGGGAGAAATCCTAATTGTATGTTAGTATCTTGTGATAAAATTAATGCTGTGACGAGTTTTTGGGTGAATGAGTTGGGTTGGGATGCCCTGGCCCTTGTCAAAGGAATAAGTATTCTTGGCAATAGTTTGGAGAAAAGGAACATTCCAAGGGCTTTTGTTGTCCAGTATCTACTGGCAAAAGGTTTGATAGACAATAATGACAGCTTATTGTTGCCTTGCTAA 1071 0.3987 MLKKQLKKLGYTTSRLDFDAGLEKFKETSPQIAAWIDRILKEKWSIAYDAEGRRFGHMTTNLSECVNKVLKDFVPLHSITYHQPFNVLFPSLCTNASSSYIIINLVFSPDSSLEASKGARFDASQKPDSVFDLFRKWGFSKPHLDHIITRESWLISCNLNKRVVPKFQFLLFKGASSSDIVFIITKTPRLLRRSHENHIVPTYELMLRFLPSDKGDLGFIFSSTQLLKRVEKLKELGFNPSTSKSAFSGALLAKHTVKESKWDEKVDVFKKWGWSDENIHEAFGRNPNCMLVSCDKINAVTSFWVNELGWDALALVKGISILGNSLEKRNIPRAFVVQYLLAKGLIDNNDSLLLPC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2931g00017 356 SMART mt_12 280 311 IPR003690 GO:0003690|GO:0006355
Gabi2931g00017 356 SMART mt_12 181 239 IPR003690 GO:0003690|GO:0006355
Gabi2931g00017 356 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Gabi2931g00017 356 Pfam mTERF 132 232 IPR003690 GO:0003690|GO:0006355
Gabi2931g00017 356 Pfam mTERF 257 348 IPR003690 GO:0003690|GO:0006355
Gabi2931g00017 356 Gene3D Transcription termination factor 3, mitochondrial 110 353 IPR038538 -
Gabi2931g00017 356 PANTHER CGI-12 PROTEIN-RELATED 96 345 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2931g00017 Gabi-Chr2931 127346 130023 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi2931g00017 mTERF 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2931g00017 K15031 - gmx:102663414 238.81