Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2931g00016 ATGGGGAGAATGGGACAAGAGTCAGATTACAAAACTCAGTTGGTATTGAAGATTTGCTCCATTTCCACCCGTTCAGTTGTATGTGTTCATAGACTTGTCTCAAATCCAGCTAAGTCAACTTTCATCGATTGGTATTGCATTCTTGGAGTGGAAGGAAATGCAGAGGTTAATACCATTCGCAAGCAATACCATAAACTTGCCTTGCAACTTCATCCAGACAAGAATAAACATCCCAAGGCTGAAATTGCATTCAAGCTTGTCTCTGAGGCATATATTTGTCTGTCTGATGCTGCAAAAAGAAAAGCTTTTAACTTAGAGAGATATAAGAACTTCTGCTTTGAGTGCAATAGAATCCCGTATACATCCAGCAATGTCCCTAGCAATTCCAATGGTTCAATTTTCAAGGCATGGAATATTATCAGCAGGTCAAGATCTTGTAAAGTTTGGAGAAATATTAGGGACATAAGAGAAAGATTGAAGGAGGAGGCTATGGTGATAGAGAAGTGTCTACAGGCAAATTCAATGTCAAGGAAAGAATCTCCCCTCTACATTCCATCTAACTATCTACATGGAAACAGGTTCAAGCATAGAGTTGAGAAAGAAATTCCTGTTTTCAATCCAAAAAACTACTTGTACCAAGGCTACCCTCATCCAAGGGGTCCTGTTTACAAGAATACTGAGACATATTGGTACTTGCAGACAGTAAATGTAGTTCACAATGACAAGGGAGGAGCTAAGTACGCTTCCCCGGTTTTTGAGGTCAAATCACAAAGGAGTATGCTCACAAGAAAATTTGTTTATGTCCCATCACAATGTTAG 819 0.3932 MGRMGQESDYKTQLVLKICSISTRSVVCVHRLVSNPAKSTFIDWYCILGVEGNAEVNTIRKQYHKLALQLHPDKNKHPKAEIAFKLVSEAYICLSDAAKRKAFNLERYKNFCFECNRIPYTSSNVPSNSNGSIFKAWNIISRSRSCKVWRNIRDIRERLKEEAMVIEKCLQANSMSRKESPLYIPSNYLHGNRFKHRVEKEIPVFNPKNYLYQGYPHPRGPVYKNTETYWYLQTVNVVHNDKGGAKYASPVFEVKSQRSMLTRKFVYVPSQC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2931g00016 272 CDD DnaJ 43 96 IPR001623 -
Gabi2931g00016 272 SMART dnaj_3 42 99 IPR001623 -
Gabi2931g00016 272 PRINTS DnaJ domain signature 63 78 IPR001623 -
Gabi2931g00016 272 PRINTS DnaJ domain signature 45 63 IPR001623 -
Gabi2931g00016 272 PRINTS DnaJ domain signature 79 99 IPR001623 -
Gabi2931g00016 272 Pfam DnaJ domain 43 104 IPR001623 -
Gabi2931g00016 272 SUPERFAMILY Chaperone J-domain 32 107 IPR036869 -
Gabi2931g00016 272 Gene3D DnaJ domain 42 145 IPR036869 -
Gabi2931g00016 272 ProSiteProfiles dnaJ domain profile. 43 107 IPR001623 -
Gabi2931g00016 272 PANTHER BNAC03G44070D PROTEIN 23 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2931g00016 Gabi-Chr2931 114230 115367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2931g00016 43 104 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 45.455 3.36e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2931g00016 - - gmx:100778573 424.861