Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi292g00003 ATGACAATGGATGAAATTTTTGCTTACATTATTATCTTTCTTGTGCTTACCTTATTTTCATTCATGTTGTTACCAAAACGAAACAGAAAACCTCAAAAGCAGACAAGTGCAAAGCTTCCTCCAGGTTCAATGGGATGGCCGTACATAGGACAAACCCTCCAACTCTACTCCCAAGACCCAAATGTTTTCTTTTCCACCAAAAAGAAGAGGTACGGCGAAATATTCAAGACCAACATCCTTGGTTGCCCGTGCGTGATGCTGGCAAGCCCTGAGGCTGCACGCTTTGTGCTTGTGACTCAAGCTCATTTGTTTAAGCCAACATACCCGAAAAGCAAGGAACTTTTAATAGGCCCTTGTGCCCTGTTTTTCCACCAAGGAGAGTACCACATGCGTTTGAGGAAGCTAGTTCAGAGGTCACTGTCCCTTGATGCACTTCGCAACTTGGTGCCGGATATTGAAGCCTTAGCCATATCTGCCATGAAATCTTGGGGTGATGGACGCGTCATTAACACATTTAAGGAAATGAAAAGATTTTCTTTTGAAGTTGGCACCCTCGCAGTTTTTGGAAATCTAGAGCCTCGGTTGAGGGAAGAGCTAAAGAAGAACTACTGGATTGTGGACACAGGCTACAATTCCTTTCCAACTCGCATCCCAGGAACCCAATACAAAAATGCACTGTCTGCAAGAAAGAGACTTGGCATGATTTTAAGGGAAATAATTTGTGAGCGGAAGGAGAAGAAATTGCTTGAAAGATCAGATCTCTTGAGCTGCCTACTGAATTGGAAAGGTGAGGAAGGAGAAGTCTTAACTGATGACCAAATAGCAGATAACATTATTGGGGTGCTTTTTGCTGCTCAGGACACCACAGCTAGTGTCATGACATGGATGGTAAAGTACCTCCACGATGAACCGAAACTTCTAGAGTCTGTAAAGGTGGAGCAAAAGGCAATTCATAAGTCAAATGAAGGTAACCTGCCGCTGAGTTGGAGTCAGACTAGAAACATGCCAATAACCTACAAGGTTGTGTTAGAGAGCTTGAGAATGGCAAGCATTATATCATTCCCTTTCAGAGAAGCAGTAGCTGATGTAGAGTACAAGGGGTTCCTGATACCAAAAGGCTGGAAAGCAATGCCTCTGTTCAGAAATATTCATCACAATCCAGAATTTTTTCCAGACCCTCAGAAATTCAACCCTTCAAGATTTGAGGTCGCACCAAAACCCAATACTTTCATGCCATTTGGTAGTGGAGTACATGCCTGCCCCGGCAATGAGCTTGCTAAGCTGGAGACTCTAATTATGATCCATCATTTGGTCACCAATTTCAGGTGGGAAGTGGTGGGATCGCAGTGTGGGATTCAATATGGCCCATTCCCATTGCCTTTGAATGGACTTCCAGCCAGATATTGGAGAGAACCTACCAGCTAG 1425 0.4393 MTMDEIFAYIIIFLVLTLFSFMLLPKRNRKPQKQTSAKLPPGSMGWPYIGQTLQLYSQDPNVFFSTKKKRYGEIFKTNILGCPCVMLASPEAARFVLVTQAHLFKPTYPKSKELLIGPCALFFHQGEYHMRLRKLVQRSLSLDALRNLVPDIEALAISAMKSWGDGRVINTFKEMKRFSFEVGTLAVFGNLEPRLREELKKNYWIVDTGYNSFPTRIPGTQYKNALSARKRLGMILREIICERKEKKLLERSDLLSCLLNWKGEEGEVLTDDQIADNIIGVLFAAQDTTASVMTWMVKYLHDEPKLLESVKVEQKAIHKSNEGNLPLSWSQTRNMPITYKVVLESLRMASIISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPDPQKFNPSRFEVAPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTNFRWEVVGSQCGIQYGPFPLPLNGLPARYWREPTS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi292g00003 474 Pfam Cytochrome P450 40 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 FunFam Abscisic acid 8 29 470 - -
Gabi292g00003 474 CDD CYP90-like 69 467 - -
Gabi292g00003 474 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 SUPERFAMILY Cytochrome P450 36 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi292g00003 474 PANTHER CYTOCHROME P450 26 36 456 - -
Gabi292g00003 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Gabi292g00003 474 Gene3D Cytochrome P450 27 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi292g00003 Gabi-Chr292 73732 77338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi292g00003 3 471 Cytochrome P450 AT3G19270 66.383 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi292g00003 K09843 - gmx:100779978 832.787