Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2929g00018 ATGTATAAGAACATGGAGGAGACACGAGAAGATGCAGGGCCCACAGAGCAAAGGCCATCCAATGTGTGGTGGCCTTCAGATTTCATTGAAAACTTTGGATCTGTTTCTTTGGGTTCTCAAGATGAGATCTTGAATAATAAAGATTCACCTGGACATTCGAACCAAGATGTTATGACACCTCAGAAGGCGTCACAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCGATACCAAATGGTTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGAAATATTTTGATGGTATTCCTACTTTGGAGGAGCTTCATGCTTTGGGTGGAGAGGGTTTTAGGGCTGATATCATTGTTGTGGATGCAGAAAAAGATAGAAAGTTATCTATGTTGAAGCAACTAATTGTGGCATTGGTTAAAGGATTGAACTCAAACCCAGCTGCAATGATTAAGAAGATAGCTGGATTAGTTTCTGATTTCTATAAACGACCACATGTAGAAAGTCCAGCAAAAACTGCACTAGAGGAATCCTCTCACATGTTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAGGCATGGTTCATGCCGTCCTCGAGCCATCTTATTTAAAGTATTAGCAGATACTGTAGGTCTTGAAAGCGGGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAATGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTGTTAAATTCTGTGGAATTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTGTTGCCCCGATCAACCAAGTCAATTCTTATGACCCACATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCACTAGAGCCAAACAGTCCCTTATATGGGGTTTCAGAGAGGTTAGATCCTGAGAGTCCAGAACATCCATCATTTCGAGCACGTGGACAATCCAAGCTTAGTGGTGATAGGGCAGCATTTAGAGATTTTTCTGATGACCAGGCTACATCAAGATCCAGCTATAAGTCAGATGGTGCATCCTCATCACAAGCTCGTAGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGTGATGATATCGCAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAAAACCGTCTTATGAGAGAACAAGGGGATGATAGTTCGTTGTCCCATTCTGCAAATGATAGTACTAGCAGTGCAGATCTTCAGAAAAATGTGTCAAATTTCCATCTTGATTATCGCGAAAGTTCCCCCTTATATTCTCTTCACCGAGACCGTGTAACTTCGCAGAAGGCAATGTCGCTACCCACTTCACCACATGATCATAGAGGAGAAGCTTCTGAGAGAAGCACGCCATCAGGATATGGAATGAATGACCAACTGGAGTCGACTTGGAATAAAGTCCTTGGATCACCAATGTTCAATAATAAACCTCTGTTACCATATGAAGAATGGAATATTGACTTCTCAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTCTTCCGTGGCTTATGGAATGGTACAGATGTTGCAGTCAAGGTTTTCCTTGAGCAGGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTGATCTTATTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGATTACTGAATATATGGAGATGGGATCTTTGTTTTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGGAGGAGATTAAGGATGTTGCGTGACATATGCAGGGGCTTGATGCACATGCATCGTATGAAGATTATTCACCGTGACGTGAAAAGTGCAAATTGTCTAGTGGATAAGCATTGGACAGTGAAAATCTGTGATTTTGGACTTTCGAGAATAATAACAGATTCTCCCATGAAAGATTCTTCCTCAGCTGGAACCCCAGAATGGATGGCACCTGAACTTATTCGAAATGAACCATTCAATGAAAAGTGTGATATCTTTAGCCTGGGAGTTATAATGTGGGAGCTCTGCACCTTGAATAGGCCATGGGAAGGCGTACCTCCAGAGAGGGTGGTTTATGCTGTCGCTAATGAGGGATCCAGATTGGATATTCCTGAAGGCCCGCTGGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCACATGAGCGGCCAAGTTGTGAGGAGATCCTGTCTCGCTTGGTGGACATCGAGTACTCAATGAGCTGA 2259 0.4329 MYKNMEETREDAGPTEQRPSNVWWPSDFIENFGSVSLGSQDEILNNKDSPGHSNQDVMTPQKASQILWRTGMLSEPIPNGFYSVIPEKRLKKYFDGIPTLEELHALGGEGFRADIIVVDAEKDRKLSMLKQLIVALVKGLNSNPAAMIKKIAGLVSDFYKRPHVESPAKTALEESSHMFENRGVQMLGQIRHGSCRPRAILFKVLADTVGLESGLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERLDPESPEHPSFRARGQSKLSGDRAAFRDFSDDQATSRSSYKSDGASSSQARRIRRRSISITPEIGDDIARAVRAMNETLKQNRLMREQGDDSSLSHSANDSTSSADLQKNVSNFHLDYRESSPLYSLHRDRVTSQKAMSLPTSPHDHRGEASERSTPSGYGMNDQLESTWNKVLGSPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGLWNGTDVAVKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLFYLIHVSGQKKKLSWRRRLRMLRDICRGLMHMHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITDSPMKDSSSAGTPEWMAPELIRNEPFNEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVANEGSRLDIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSMS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2929g00018 752 MobiDBLite consensus disorder prediction 1 20 - -
Gabi2929g00018 752 ProSitePatterns Protein kinases ATP-binding region signature. 502 523 IPR017441 GO:0005524
Gabi2929g00018 752 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 322 744 - -
Gabi2929g00018 752 Pfam Ethylene-responsive protein kinase Le-CTR1 61 256 - -
Gabi2929g00018 752 CDD STKc_MAP3K-like 502 744 - -
Gabi2929g00018 752 Gene3D Transferase(Phosphotransferase) domain 1 575 751 - -
Gabi2929g00018 752 ProSiteProfiles Protein kinase domain profile. 496 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2929g00018 752 FunFam Serine/threonine-protein kinase isoform 1 486 574 - -
Gabi2929g00018 752 Gene3D Phosphorylase Kinase; domain 1 489 574 - -
Gabi2929g00018 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Gabi2929g00018 752 SUPERFAMILY Protein kinase-like (PK-like) 472 744 IPR011009 -
Gabi2929g00018 752 Pfam Protein tyrosine and serine/threonine kinase 497 744 IPR001245 GO:0004672|GO:0006468
Gabi2929g00018 752 MobiDBLite consensus disorder prediction 275 357 - -
Gabi2929g00018 752 MobiDBLite consensus disorder prediction 383 405 - -
Gabi2929g00018 752 MobiDBLite consensus disorder prediction 390 405 - -
Gabi2929g00018 752 SMART serkin_6 496 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2929g00018 752 MobiDBLite consensus disorder prediction 431 461 - -
Gabi2929g00018 752 MobiDBLite consensus disorder prediction 330 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2929g00018 Gabi-Chr2929 255850 280064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2929g00018 5 751 MAP Kinase Kinase Kinase AT3G58640 63.936 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Gabi2929g00018 PK_Tyr_Ser-Thr 2.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2929g00018 - - gmx:100810612 1261.9