Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2929g00012 ATGGTAAACGACTGTCTTCGTAACATTGGCAAAGTTTGGTTCCTCGGTAGGCCTCGTTGTCTGTCTGCCCACCAAACCAACCGGCCCTCAATTTTCGAAACACAGTCCAAAAACTCAATCTCTCCGCCGCTCATGGACTCCGTCGTCGGAGCTCCGCCTCCCGTCGCCTCCGCTCCGCCTCGACCGCCGTCGTCGTCGTCTCCGTTTCCCGGACGGGAGGACTGTTGGAGCGAGGACGCCACGTTCACCCTCATCGACGCCTGGGGCGAGCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGCACTGGCAGGAGGTCGCCGACGCCGTCAACGACCGCCACGCCGGCGGCAACTCCGGCGGCGCTACCAACAACAATAAGAAAGCGCGCCGGACCGACGTGCAGTGCAAGAACCGAATCGACACGCTGAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAATCCGACGGCGGTTACCAAAGCCCGTGGCCATTCTTCCCCCGCCTCGACGCTCTCATCGGCGATACTTTTCCGATCAAGAAGCTCTCGCCGCCGGCGAACACTCGGAGCACTCCTTCCGCCGCGAAGGCACAGCCGCTGGCGTGGATATCCTCTCATCCTGTCGGTCCCCGATCCGGCACTCAGAAACGGCCGCCGGCGATCAGGGAGAATTCGTCCTTTCGCCGGAATTTCTCAGCTTTCGCGGCGGCGGCGGCGGCGGCCGCCGAGGCGGAGAGCGGGGAGTCGGAGGATTGGAGGTCTAGCAGTGGCACTGGGAGTAGGAAGAGAGAAAGGGAGAGTGATAAGGATTGGGAGTTTGGGTGCAGAGAGCTTGCACAGGCCATTGAGAGATTTGGAGAGATATATGAGAGAGTGGAAGCAGCGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAGTTTGCTAAGGATTTGGAATACCAAAGGATGCAGCTTTTCATGGAAACGCAGGTTCAGCTGCAGAAAATCAAACGCACCAAGCGTTCTTCCGGAGCTGACAGTTTCTCATAG 1050 0.5895 MVNDCLRNIGKVWFLGRPRCLSAHQTNRPSIFETQSKNSISPPLMDSVVGAPPPVASAPPRPPSSSSPFPGREDCWSEDATFTLIDAWGERYLELNRGNLRQKHWQEVADAVNDRHAGGNSGGATNNNKKARRTDVQCKNRIDTLKKKYKIEKARVSESDGGYQSPWPFFPRLDALIGDTFPIKKLSPPANTRSTPSAAKAQPLAWISSHPVGPRSGTQKRPPAIRENSSFRRNFSAFAAAAAAAAEAESGESEDWRSSSGTGSRKRERESDKDWEFGCRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKIKRTKRSSGADSFS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2929g00012 349 MobiDBLite consensus disorder prediction 114 134 - -
Gabi2929g00012 349 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 58 340 IPR044823 -
Gabi2929g00012 349 MobiDBLite consensus disorder prediction 33 74 - -
Gabi2929g00012 349 MobiDBLite consensus disorder prediction 47 67 - -
Gabi2929g00012 349 Pfam Myb/SANT-like DNA-binding domain 73 176 IPR044822 -
Gabi2929g00012 349 Coils Coil 293 313 - -
Gabi2929g00012 349 MobiDBLite consensus disorder prediction 250 273 - -
Gabi2929g00012 349 Gene3D - 76 151 - -
Gabi2929g00012 349 MobiDBLite consensus disorder prediction 187 224 - -
Gabi2929g00012 349 MobiDBLite consensus disorder prediction 246 273 - -
Gabi2929g00012 349 MobiDBLite consensus disorder prediction 187 202 - -
Gabi2929g00012 349 FunFam trihelix transcription factor ASIL2 76 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2929g00012 Gabi-Chr2929 201397 205038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2929g00012 280 338 Trihelix Transcription Factor Family AT3G14180 55.932 1.42e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi2929g00012 Myb_DNA-bind_4 2.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2929g00012 - - lang:109355153 401.364