Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2927g00031 ATGGCTGAGGTGAAATCAGAGGAGTGTTGTATGGAGAATAAACAATCTACTGCTGCTTCATGTTCCTCTGTTTCTGAAGGCAGTGGCAGTGCAATTCACAAGTCTCCAGGGATATGTAGCACAGCATCCGCATCGCCTTCAAATCGAAGGACCACTGGACCTATAAGGCGTGCTAAGGGTGGTTGGACAGCACAGGAGGATGAGACATTAAGGAATGCTGTTGTAGCTTTTAAGGGCAAGAGTTGGAAGAAAATAGCTGAGTTTTTTCCTGATAGATCAGAAGTTCAGTGTCTGCACAGATGGCAAAAAGTTCTTAATCCGGAACTTGTTAAAGGACCTTGGACCCAAGAGGAGGATGTTAAAATTGTTGAACTGGTATCAAAATATGGGCCTACAAAATGGTCTTTGATAGCTAAGTCTTTGCCTGGTCGAATAGGGAAACAGTGTCGAGAGAGGTGGCACAATCATCTTAATCCCGACATAAAGAAGGATGCCTGGACTTTGGAGGAGGAAATGGCCCTGATGAATGCTCATCGCATACATGGGAACAAGTGGGCTGAAATAGCTAAGGTCCTTCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAAAAAAAGTTGGATTTTTATTTGGCTACAGGAAGACTTCCACCAATTCCAAAGAACAGTCCACAAGTTGCTGTTAAAGATTCAATTAGACAATCTGCTTCTAAAACAATACTTGTTTCTTCAAATAAAGAATTAAATGTAGCTGTTGAAACGTCATCTGAAACTACAGCCATTAGCAAGCTAGATGACTGTGGCAAGAATCAGTTTGAGTCCTCAGGAACAGTTAGAGAAGTTGGTGATTCATCAAGTGTTCCTGCAAATGAATCTGCTGATTCTGACTGTGCAGACATCGATCTTTGTTATAGCAACTCGGAACAAGTGTCAAGAGCTAATTTTGGAATAACTTATGGGCCAAAATCTGAGAATTCTGGACACAATGGATGCTCAACCATTGAGAATTGTATAAATAATGGTGAAATGAGCAGTAACAGGTTAATCAGAACATCTTTTTTGCAAGAAAGTCCAACCTTTGGCTCTTTATGTTATGAGCCACCACAGATAGATGGTTCAGTTCCTTCAGATTCTCTTTATTTAGTTTCCTTGCAGAACAAGTATTGCTCTAATCCAACATTGTCACCTCTTGGTTTTGTTACACCTCGAGTGAAGGATAATGGATTATGCACAGAAACACCTCAATCAATATTGAAAAAGGCTGATGATACTTTTCCAGATGATAGTCCCTCCATATTGACCAGGAGAAGGTCTGCACTCGAAGTACGCACCACTCTTAATAATTTTTTGAAATCAGGTTATGATTCACGTACTTCCAATGAACCAGAGAGTGCCAAGGATAATTCTGGTTCTGAAGTTGGGAGGTTCTCTGACAGTCCAGCAAGCCATGACAATGGGAGTGGCATTCCCAATAATAAAGCATTCAATGCATCTCCACCATACCGGTTAAGATCCAAACGAACAGCGGTTATCAAGTCTGTGGAGAAACAACTTGAGTTTGCATTTGATGAAGAGAAGAATGACGACAGTATCAACTCTAAGGAAAAATCTGCAAAGAGGAGCAATGTGATGACTGAAGATTGTCTGCATGAAACAAAGATGGTATTGACGTAG 1689 0.4079 MAEVKSEECCMENKQSTAASCSSVSEGSGSAIHKSPGICSTASASPSNRRTTGPIRRAKGGWTAQEDETLRNAVVAFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDVKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEEMALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGRLPPIPKNSPQVAVKDSIRQSASKTILVSSNKELNVAVETSSETTAISKLDDCGKNQFESSGTVREVGDSSSVPANESADSDCADIDLCYSNSEQVSRANFGITYGPKSENSGHNGCSTIENCINNGEMSSNRLIRTSFLQESPTFGSLCYEPPQIDGSVPSDSLYLVSLQNKYCSNPTLSPLGFVTPRVKDNGLCTETPQSILKKADDTFPDDSPSILTRRRSALEVRTTLNNFLKSGYDSRTSNEPESAKDNSGSEVGRFSDSPASHDNGSGIPNNKAFNASPPYRLRSKRTAVIKSVEKQLEFAFDEEKNDDSINSKEKSAKRSNVMTEDCLHETKMVLT 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2927g00031 562 MobiDBLite consensus disorder prediction 21 52 - -
Gabi2927g00031 562 MobiDBLite consensus disorder prediction 456 505 - -
Gabi2927g00031 562 FunFam Transcriptional activator Myb isoform A 111 163 - -
Gabi2927g00031 562 Gene3D - 58 110 - -
Gabi2927g00031 562 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Gabi2927g00031 562 CDD SANT 113 157 IPR001005 -
Gabi2927g00031 562 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Gabi2927g00031 562 Pfam Myb-like DNA-binding domain 114 174 - -
Gabi2927g00031 562 CDD SANT 62 105 IPR001005 -
Gabi2927g00031 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Gabi2927g00031 562 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Gabi2927g00031 562 FunFam Transcriptional activator Myb isoform A 58 110 - -
Gabi2927g00031 562 PANTHER MYB PROTEIN-RELATED 59 144 - -
Gabi2927g00031 562 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Gabi2927g00031 562 MobiDBLite consensus disorder prediction 21 63 - -
Gabi2927g00031 562 Gene3D - 111 162 - -
Gabi2927g00031 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Gabi2927g00031 562 MobiDBLite consensus disorder prediction 526 547 - -
Gabi2927g00031 562 SUPERFAMILY Homeodomain-like 56 112 IPR009057 -
Gabi2927g00031 562 MobiDBLite consensus disorder prediction 456 499 - -
Gabi2927g00031 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Gabi2927g00031 562 Gene3D - 164 243 - -
Gabi2927g00031 562 SMART sant 162 210 IPR001005 -
Gabi2927g00031 562 SMART sant 110 159 IPR001005 -
Gabi2927g00031 562 SMART sant 58 107 IPR001005 -
Gabi2927g00031 562 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Gabi2927g00031 562 CDD SANT 165 208 IPR001005 -
Gabi2927g00031 562 FunFam Transcription factor MYB3R-2 164 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2927g00031 Gabi-Chr2927 399642 409057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2927g00031 2 541 MYB Transcription Factor Family AT3G09370 49.727 5.65e-156 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi2927g00031 Myb_DNA-bind_6 8.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2927g00031 K09422 - gmx:100793280 852.047