Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2927g00029 ATGGCTACTCCAAAAACTGTCAAATCTTGCACCCCTAAGAAACTCTCCAACAACCCCATTTCAGTTTCCAAGGTCAGGGTCATCGTGAGGGTCAGACCCTTCCTTGCTCACGAAATCTCAGCAAAAAATGGCGACCCAATTTCGTGTATTTCCGTCCTCGACCAAGATTTTGAGTCCCCAGAAGAAGAAGTAGCAGTTTATCTCAAAGACCCACAAACCAGCCGAAATGAGTGCTACCAGTTGGATTCTTTCTTTGGCCAAGAAGATAACAATGTGGGTCAGATATTCTGCAGAGAAGTAAGTCCCATGATACCAGGGATCTTCAATGGCTCCAATGCCACGGTGTTTGCTTATGGGGCTACTGGCAGTGGGAAGACATACACCATGCAGGGAACTGAGGAACAACCTGGCTTGATGCCACTGGCAATGTCCATGATCCTGTCTATTTGCCAAAGCACTGGCAGCATAGCACAGATTTCATACTATGAGGTCTACATGGACAGATGTTACGACCTTTTGGAGGTCAAAGCAAAGGAGATTTTAGTTTGGGATGACAAAGATGGGCAAATTCACCTCCGGGGACTATCTCAGGTTCCCATAAACACAATGTCTGAATTTCAGGAGGTTTTCTCCTGTGGAATTCTTAGACGTAAAGTTGCACACACAGGCCTCAATGATGTCTCTAGTAGGAGTCATGGAGTGCTTGTGATATCTGTATCCACTCCTTCTGTGGATGGCACAGGAGATGCTGTATGTGGAAAGTTGAATCTTATAGACCTTGCAGGTTACTGCTTTCTACTCAATTGGGGTCATGGATTAGATGTCTTGCAAGCATATGATTATGCTTATGTGTTTAAGATTGAATCAGGTAATGAAGACAATAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCCAAGATAAACCAGTCCTTGTTTGCACTGTCAAATGTTATATATGCATTGAACAACAACAAACCTCGAGTACCCTACCGAGAAAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGTGGAACTAGTCGTGCACTGATGGTTGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTCGATCAAGGCATGTCACCAATTTTGTACCTTCAGCTCATAAACAAGAGACCCCAAAAGTTAAAGTTGACATGGAAGCCAAATTGAGAGCTTGGCTAGAATCAAAAAACAAAACAAAGAGCTCACAAAGACTCGGAACATTTAATTCTCCACTTTTCAAAAAAACTCCCAGTTCCATCATTACCCCTGCTAAGAGATGCGTTAACTTTAATAGTTCAGTGAAGGGGGGAAGAACTGCCATCAACCAAGATGCTCAGCATACAAATGAAAGGGCCTTTGCTGTGGCTTTTGGAAATTTACTAGATGGTGAGGGTCCTTTTGATTCTTGCATGGAGGGCGCACATTGTGGTGTTAAGGACAATAATAACTTAGAGACTGACCATGATGCCACTAAGGCTGCATGGGAATCATATAAAGATCTACCTGTTGAGTCATTAAGTAAAGGGGTGAACTCACCAATTACAAATGAGAGTAAAAATGCGGTACAAAGTCCTTTAAGAAAAGCCCTCTCCCCCATCAACATCAATGGTAATAATCAAAAGCCCCTTGAGGCATTGTCTTTCACACAAACACCTTTTTCTGAAACCTGCTCCACTAATAAAGGGATACAGAAGAATGGCACTCCACTTGACAAATTCAGTACACGAAGTTCTACACTGAAGAACTGTCTAGTCCAAGAATACATTGATTTCTTAAATAATGCAAGCAGAGAGGAATTGCTAGAGTTGAAGGGCATAGGAGAGAAAATGGCAGAATACATAATAGACCTTAGAGAAGAAAGCCCTCTAAAATCGTTAAATGATTTGGAGAAAATTGGCCTCTCTTCCAAGCAGGCCTATAACCTGTTCACTAAAGCTGCTAAAAAACTATTTGAAGATAAAGAAGAAGAATCAATACTCATTTGA 2025 0.4222 MATPKTVKSCTPKKLSNNPISVSKVRVIVRVRPFLAHEISAKNGDPISCISVLDQDFESPEEEVAVYLKDPQTSRNECYQLDSFFGQEDNNVGQIFCREVSPMIPGIFNGSNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSMILSICQSTGSIAQISYYEVYMDRCYDLLEVKAKEILVWDDKDGQIHLRGLSQVPINTMSEFQEVFSCGILRRKVAHTGLNDVSSRSHGVLVISVSTPSVDGTGDAVCGKLNLIDLAGYCFLLNWGHGLDVLQAYDYAYVFKIESGNEDNRRTCNEGIRLQESAKINQSLFALSNVIYALNNNKPRVPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVHTVSLAARSRHVTNFVPSAHKQETPKVKVDMEAKLRAWLESKNKTKSSQRLGTFNSPLFKKTPSSIITPAKRCVNFNSSVKGGRTAINQDAQHTNERAFAVAFGNLLDGEGPFDSCMEGAHCGVKDNNNLETDHDATKAAWESYKDLPVESLSKGVNSPITNESKNAVQSPLRKALSPININGNNQKPLEALSFTQTPFSETCSTNKGIQKNGTPLDKFSTRSSTLKNCLVQEYIDFLNNASREELLELKGIGEKMAEYIIDLREESPLKSLNDLEKIGLSSKQAYNLFTKAAKKLFEDKEEESILI 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2927g00029 674 CDD KISc_KID_like 25 377 - -
Gabi2927g00029 674 SUPERFAMILY RuvA domain 2-like 599 645 IPR010994 -
Gabi2927g00029 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 379 IPR027417 -
Gabi2927g00029 674 Pfam Kinesin motor domain 30 262 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 Pfam Kinesin motor domain 290 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 Pfam Helix-hairpin-helix motif 605 645 - -
Gabi2927g00029 674 Gene3D - 591 662 - -
Gabi2927g00029 674 SMART kinesin_4 22 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 FunFam Kinesin-like protein KIN-10C 591 663 - -
Gabi2927g00029 674 PRINTS Kinesin heavy chain signature 254 272 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 PRINTS Kinesin heavy chain signature 110 131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 PRINTS Kinesin heavy chain signature 331 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 Gene3D Kinesin motor domain 21 420 IPR036961 -
Gabi2927g00029 674 ProSiteProfiles Kinesin motor domain profile. 24 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2927g00029 674 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 23 513 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2927g00029 Gabi-Chr2927 345148 349179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2927g00029 24 411 Calmodulin-binding Proteins AT5G65930 28.607 1.63e-38 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2927g00029 K10403 - gmx:100804591 1068.53