Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2927g00023 ATGGGTAACAGAATCGGAAAGGCCTGTCTCTGCAACGCCGGCGCCGGTGCCGGAGATATCTCCGGCAGTTTCGACAACAGGATTAGTTCCCTCTCCAGCCAATACAATAAAACTCTTGGCAACTCCATCTGCTACGTCAGACCGGAACCCAGTCGGTTCGCCGGCGATGTGTCCTCCGATGATGACGTCACCCTCATGACTTTCCGGTCAGTTTCCGGCGCCACTGTGAGTGCAAACTCGTTGTCAACACCTTCAACTTCTCTTGGAGATTCTCTTCGGCACAGCACCGTTATGGATTCCTCTGCTTCGTTTGAAAGCTCTGGTTCCTTCACTCCAACAATGGTGCCTCTGCAACTGCAACATCGACATGATCCTCGTGGCTCCTCTGTGGGTAGCTCCATGGAGAGAGGTTTATCTTGGAATCCTGTGATGGGTCGCTTCATGCCAAGTCCTCGTGATCGTGTTTTGAAGGGTGACCCCATTGAGAAAGTTTCTGAACCTGTGAAGAAACAGAAGAAAAGCTTGAAGCAAATTCTGAGTAGAGCGTTTTTCAACACACTTTCGTTAGGGAAAAGGTTTGTTCCCAAGGAAAACGAGAATGCTAATAATGCTAGAGTGAGTTGTAGCACTAGTTCGAGTGGTGAATTGAGCTTGCATGGTGTTGAGAGTGATAAGTGTTTGGGTGGTGGCGGTGGGGAGCTTTTAATGGGGTGTCAGAATCTTCATTGGGCTCATGGGAGAGCTGGTGAGGATCGTGTACATGTTGTGATTTGTGAGGATCATGGATGGGTTTTTGTTGGGATTTATGATGGGTTTAATGGCCCTGATGCCACTGATTATCTTCTTAACAATCTGTTTTATGCAGTGAATGATGAGCTCAAGAGTGTACTGTGTAGTAAAGCAAAAAGTGCAGCAGATTCTAGCCACTCAGATGTGTTACAAGCTCTTTCAGAGGCGTTGAGTAAGACTGAGGATGCATTTCTGAAGATTGTTGATGAGATGATTACTCATAATCCTGAGTTGGCTATGATGGGTTCTTGTGTTTTGGTAATGTTGTTGAAAGGTGAAGATGTTTACTTGATGAATGTGGGAGATAGTCGTGCTGTCTTAGCTACTCAGACTGGGAATTCCCTTCAACTCACAATGGAGCATAGCACTCACATAAAAGAGGAGGTTTACAGAATCAGGAAAGAGCACCCAGATGATCCTTCTGCAGTAACAAAAGGCCGGGTTAAAGGTTACTTGAGTGTCACAAGGGCTTTTGGTGTTGGGTTCCTTAAGAGGCCTAAACAAAATAACGCACTATTAGAGAGTTTCAAAGTTAGCTACAAGGGGGAATCTCCATACATCACTTGTTACCCTTCACTCAACCATCACAGGCTCAGCCCAAATGACAAATTCCTGATATTGTCTTCTGATGGACTTTATCAATACTTCACCAATGAAGAAGCAGTTACCATGGTAGAGTCATTCATAACTTCATGTCCAGATAAAGATCCTGCACAATTTCTCATTAAAGAAGCACTAAGTAGAGCAGCCAAAAAAGCAGGTATCGAGTTCCATGAGTTGCTTAATATCCCACATGGGGAAAGGCGTCTTTACCATGATGACATCTCTATTGTCATTATCTCCTTGGAGGGAAAAATATGGCGTTCATTAGCGTAA 1665 0.4486 MGNRIGKACLCNAGAGAGDISGSFDNRISSLSSQYNKTLGNSICYVRPEPSRFAGDVSSDDDVTLMTFRSVSGATVSANSLSTPSTSLGDSLRHSTVMDSSASFESSGSFTPTMVPLQLQHRHDPRGSSVGSSMERGLSWNPVMGRFMPSPRDRVLKGDPIEKVSEPVKKQKKSLKQILSRAFFNTLSLGKRFVPKENENANNARVSCSTSSSGELSLHGVESDKCLGGGGGELLMGCQNLHWAHGRAGEDRVHVVICEDHGWVFVGIYDGFNGPDATDYLLNNLFYAVNDELKSVLCSKAKSAADSSHSDVLQALSEALSKTEDAFLKIVDEMITHNPELAMMGSCVLVMLLKGEDVYLMNVGDSRAVLATQTGNSLQLTMEHSTHIKEEVYRIRKEHPDDPSAVTKGRVKGYLSVTRAFGVGFLKRPKQNNALLESFKVSYKGESPYITCYPSLNHHRLSPNDKFLILSSDGLYQYFTNEEAVTMVESFITSCPDKDPAQFLIKEALSRAAKKAGIEFHELLNIPHGERRLYHDDISIVIISLEGKIWRSLA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2927g00023 554 SUPERFAMILY PP2C-like 247 546 IPR036457 -
Gabi2927g00023 554 Pfam Protein phosphatase 2C 263 515 IPR001932 -
Gabi2927g00023 554 PANTHER PROTEIN PHOSPHATASE 2C 199 543 IPR015655 GO:0004722|GO:0006470
Gabi2927g00023 554 CDD PP2Cc 248 545 IPR001932 -
Gabi2927g00023 554 Gene3D - 228 551 IPR036457 -
Gabi2927g00023 554 ProSiteProfiles PPM-type phosphatase domain profile. 218 545 IPR001932 -
Gabi2927g00023 554 SMART PP2C_4 234 543 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2927g00023 Gabi-Chr2927 244585 246913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2927g00023 1 552 PP2C-type Phosphatase Gene Family AT2G28890 44.560 1.92e-165 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2927g00023 - - sind:105174446 487.648