Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2927g00021 ATGCCATCGTCTTCCTCCTCCGTAACGAATCCTCGTCTTCGCACTCTCCTCTCCTTCTTCAGAAAATGGACCACAAAGGACTACACAATCGCCGCATTCGCCTTCATCATCCTCTTCTCTTTCGCTCTCATCTCCCAATTGCAACCCCGTTCCGATACCCATCTCGTTCCCTTAACCCTTCTCCGTAACGCCAACCAAAGAGGAGCGCTTTGCTTGGATGGGAGCTCCCCCGGCTACCATTTTCAAAAGGGGTTCGGATCCGGATCTCGCAATTGGTTGCTTCACGTCGAGGGAGGAGGGTGGTGCAATTCAATATCTTCGTGTTCTCAGCGAAAAATGTCAGCTTTGGGGTCATCAAAGTATATGCAGACACCAGTTCCTTTTTCAGGAATATTAAGCTCTGACCCTTCTCAAAATCCCGATTTCTTTAACTGGAACAAGGTGAAGATACGGTATTGTGACGGTGCATCTTTTGCTGGTCACCCAGAAAGTGAGGTAAGCTTGAAAGGAAGTGGATTGTTCTTCAGAGGGCAGATCATATGGGAAACCATTATGGATGAACTCTTATCAATTGGCATGTCTAAAGCAAAACAGGCTCTGCTTTCAGGATGCTCTGCTGGAGGGTTGGCAACTCTTGTACATTGTGATGACTTCCGACAAGTGCTTCCAAAGGAGGCAACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTTCAGGGTGTTGCAAAAAGCTTGCAAAAAGAGTGCATTGCTAAAATGGAACCATATAAGTGTTTCTTTCCATCAGAAATTATTAAAAACATAAAAACTCCAGTGTTCCTTGTTCACCCAGCTTATGATTTCTGGCAGATACACAATATTTTGGTACCTGAAGGATCAGATCCACGCGGTCACTGGAAAAGCTGCAGGTTGAACATTCACAATTGTGATGCTAACCTGATTGATATACTTCACCGTTTCCGTAGTTCTTTGCTGAAGGCTGTAAATGAATTTGAGCAACGAAAGGAGATTGGAATGTTTATAAATTCATGCTTTATCCATTGCCAGACTTGGATGGGAGAGACATGGCATTCACCCAATTCTCCTAAAATAAACGATAAGACAATTGCTGAATCTGTTGCTGATTGGTTCTTTGACCGAGAAGTGGTAAAGCGTATTGACTGCCCTTATCCATGCAATCCCACTTGCCATAATATGGATTTCAGCTAA 1272 0.4395 MPSSSSSVTNPRLRTLLSFFRKWTTKDYTIAAFAFIILFSFALISQLQPRSDTHLVPLTLLRNANQRGALCLDGSSPGYHFQKGFGSGSRNWLLHVEGGGWCNSISSCSQRKMSALGSSKYMQTPVPFSGILSSDPSQNPDFFNWNKVKIRYCDGASFAGHPESEVSLKGSGLFFRGQIIWETIMDELLSIGMSKAKQALLSGCSAGGLATLVHCDDFRQVLPKEATVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVAKSLQKECIAKMEPYKCFFPSEIIKNIKTPVFLVHPAYDFWQIHNILVPEGSDPRGHWKSCRLNIHNCDANLIDILHRFRSSLLKAVNEFEQRKEIGMFINSCFIHCQTWMGETWHSPNSPKINDKTIAESVADWFFDREVVKRIDCPYPCNPTCHNMDFS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2927g00021 423 Pfam Pectinacetylesterase 52 403 IPR004963 GO:0016787
Gabi2927g00021 423 PANTHER NOTUM-RELATED 38 420 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2927g00021 Gabi-Chr2927 227801 233667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2927g00021 11 389 Carbohydrate Esterase AT3G09410 58.929 1.34e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2927g00021 K19882 - gmx:100792819 675.626