Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2927g00013 ATGTCCCCAGCAGGGTCATCAAGATGGAGTCCTACTACAGAACAGCTCATGGTCTTGGAGGAACTGTACAGAAGTGGGATTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATAACAACACACCTTTCTTTCTATGGAAGAATAGAAGGAAAGAATGTGTTCTATTGGTTTCAGAACCATAAGGCTAGGGATAGACAGAAGCTAAGGAGGAAACTCAACAAGCAACTGCAGCTACAGCAACAACTCCAAGTTCATCATTGCCAACTGAATCAGGATATCACTAACCATTTTGTTGGTAGCTTTGGTTATCCTCCTGCTTCTACTAGCCAAGAATTTTCCTTTTATAACTCACCTAGCTTGCTTTTTCAGGGAGGAGCTACAAGCACTTCAGAAAGGGCAATGAACTGCAAATGGAATGTGTATAACAAGCAAAGTTTGGTGGAGAAGAAAGACAAGACACTCTGCAACTATGGTTTGACACTTGAGGATGTTAATCAAGCATCTTTATGTTGCACTAGACCTCTCAAGACACTTGATCTCTTTCCACTCACAACAACTAGAATCAAAGAAGACTGCACCACATTGCCCAAGTAG 594 0.4158 MSPAGSSRWSPTTEQLMVLEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQLQVHHCQLNQDITNHFVGSFGYPPASTSQEFSFYNSPSLLFQGGATSTSERAMNCKWNVYNKQSLVEKKDKTLCNYGLTLEDVNQASLCCTRPLKTLDLFPLTTTRIKEDCTTLPK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2927g00013 197 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Gabi2927g00013 197 CDD homeodomain 8 67 IPR001356 GO:0003677
Gabi2927g00013 197 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 190 IPR044555 GO:0003700|GO:0099402
Gabi2927g00013 197 SMART HOX_1 4 71 IPR001356 GO:0003677
Gabi2927g00013 197 Gene3D - 3 67 - -
Gabi2927g00013 197 FunFam WUSCHEL-related homeobox 4 6 73 - -
Gabi2927g00013 197 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Gabi2927g00013 197 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2927g00013 Gabi-Chr2927 178234 179105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2927g00013 1 74 Wox Gene Family AT2G28610 82.432 2.15e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi2927g00013 Homeodomain 6.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2927g00013 - - gmx:102663963 283.108