Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2926g00001 ATGGGAATTCAGAAATATATGGTTGCCAAAAAGGCTAGCTTTTGTGTTCTTTTGGTTCTTCTTCTTGTGGCAGTGGTCAGCTTTGTAGGAAAGAAGGAAACACAAGATGACTTTGTTAGCGAACTACTTGATCCATCTTCTGGATTGTTAGACAAGCACACGGCAAAGGTACTATGGACCACACGCTGGAACAATTTAATTCATTTAAAAAAAAAGGTTGAAGATCATGATTTATGCCTCCCACAGGAATCGTCTAGTAGCACCAATAAAGTCAGTTCAGAGATTCAACCATTAACGCGATCAGACATCCAAAAATTGATTAATGCTTGTCATCCTCAGTTCAAGGAAGAGTTTCTTCACTGTTTGAGAAGAAATAATCTTCTATTACGTGTCTTGGGAGAAGAGGATGATTCCAAGATTTGGCATGTTGCTTATATGGGATTACTTTTTTCCAAATCCAGTGTTCCTAGAAGAAATTTGGGCCGTGTTTTGCTCCAGCACATATCAGAAGCACCTAGTTCAGGCCCTGCAGTTGGATCTCCTACACCCAGTCTTTCACCATCTCCTGGACCCAATCTAGCACCATCACCTGAACCCGATCTATCCCCGTCACCTGCTCCAGCGCCTCCAGTTCTTACACCTCTGCATCCTCCTTTGCCACCAACGGCATTTTTCCCAAAACTGACACCACCAGCAGCTGCAGATGTTTCTACTCCTCAATCTTCTGAGACTAACAAACAGACAGATAAACATAGTAATAAAAAAACAGTTGTTCTTGCTGTAGTTATAACTGCAGTGGTGACAGTTATAGCGGCAGCACTGCTCTTTTTATTCTGTAGAGGGTTTTGTAAGACTGGCCGAGTTAGACAAAATGATCAGAGACCCCTTCTCAGTTTGAGCATCAGTGACTATTCTGTTGGTCCTTCCAGTTATGCTTTTGGAAACTCAATGAAAGGGAAGAAACTTGGGTTTCAGTCATCGAGTAATAATTTAGTAGACAACAAGACCTCAGTGCAAGAAAGTCAATCAATAGGAGCTCTTAGTGCTGCTGCCGGATCACCATTTGAACTGAAATATCCTCCCGGGAGAGTGGGAACCATCCCTTCTGGAATGCCTCCTTTAAAACCTCCTCCAGGCAGGATGAATCCTCTTCCCGCTGAGCCACCTTCATTTAAGCCCTCTGGTAATAATGCTGCTGCTGCCGCTCGTCCTCCTCCTCTTGCAGCTCCTCTTCCTCCTCCTGCAGCTCCTCTTCCTCCTGCAGCTCCTCTTCCTCATGCTCCTCGACAGCCTGGTGTTGGTAGCACTCCACATCCTGGTCCTCCACCACCACCACCCCCAGCATCAACTGGTGCCAAACCTGGTCCTCCTCCTCCACCTCCCCCAGCACCAGCTGGCGCTAAACCCGGTCCTCGTCCACCACCGCCTCCTAAGAGTGGTATGGCTCCTCCTCGTCCTCCTCCTTCGATTGGCCCAAAGGTGCCTCAGCCATTAGGTAGTAAACCAAAAGCTACGGAAGATGTTGAAGCTGATGCTCCTAAAGCCAAACTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCGAACTCAGATCAATCTATGGTTTGGAATCAGATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGCTATAATGCTGTGGATAAAAACAATGGTAAACGACAGAAAGAGTCTTCCTCCCAAGACCCTTCACCTCAGTTTATCCAGATCATTGACAGAAAGAAATCACAGAATTTATTAATTCTTTTGCGAGCATTGAACGTGACAATGGAAGAAGTTTGTGATGCACTTTATGAAGGAAATGAGCTGCCCTCAGAATTCCTTCAAACCTTGCTGAAGATGGCACCAACATCAGAGGAGGAACTTAAGCTTAGGCTTTTTAGTGATGAGCTATCTAGACTTGGGCCTGCCGACCGGTTCCTGAAAGCCATGGTTGACATTCCATTTGCTTTTAAGCGAATGGAAGCACTGCTTTTCATTAATACTCTTAAAGAAGAGCTCACTGCTACTATGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTATGGAACTAAGAAACAGCAGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGATGGAACATTCCGCGGTGGCGCACAAGCATTTAAACTTGATACACTTCTGAAATTATCTGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACACTTTGTTGTTCAGGAGATTGTCCGCTCTGAGGGCATAAAAGCTGTTAGAGTGGCAAAAGAGAGCCAGAGTTTGTCTAGTGTTAAATCTGATGACCTTCTTGAAGATAACACTGAGGAGACAGAAGATCACTACCGGGAAATTGGTCTTCAGGTGGTTTCGCGCTTGAGCAGTGAACTTGAGAACGTAAAAAAAGCAGCAGTTCTAGATGCTGACAGCTTAACACGAACTACTGCCAAACTCGGCCATGGGCTTGTGAAAACCAGAAACTTGGTAAACAAAGACCTGAAGAATGTGGAGGAAGATAGAGGGTTCATTGAGGCAGTGAAAAGTTTTGTGCAGAACGCTGAGGTTGATGTTATGAAACTGCCGGAAGAAGAGAAGAAAATCATGGCTTTGGTGAAGAGCACTGGTGATTACTTTCATGGGAATGCTGGGAAGGATGAAGGCTTAAGATTGTTTGTAGTAGTAAGAGACTTCTTAATAATGTTGGATAAGGTATGCAAGGAGGTTAGAGATGCATACAAGAAGCAAGCTAAAACTCTAAAACAAGAGACTTCTCGAGGGTCATCTTCCTCTGAGACACGTCCACCACCTTCCGATTATCGTCAGCGGCTTTTTCCGGCAATCACGGAAAGGAGGGTGGATGACCATAGTTCAGATGATGAGAGTCCATAG 2925 0.4458 MGIQKYMVAKKASFCVLLVLLLVAVVSFVGKKETQDDFVSELLDPSSGLLDKHTAKVLWTTRWNNLIHLKKKVEDHDLCLPQESSSSTNKVSSEIQPLTRSDIQKLINACHPQFKEEFLHCLRRNNLLLRVLGEEDDSKIWHVAYMGLLFSKSSVPRRNLGRVLLQHISEAPSSGPAVGSPTPSLSPSPGPNLAPSPEPDLSPSPAPAPPVLTPLHPPLPPTAFFPKLTPPAAADVSTPQSSETNKQTDKHSNKKTVVLAVVITAVVTVIAAALLFLFCRGFCKTGRVRQNDQRPLLSLSISDYSVGPSSYAFGNSMKGKKLGFQSSSNNLVDNKTSVQESQSIGALSAAAGSPFELKYPPGRVGTIPSGMPPLKPPPGRMNPLPAEPPSFKPSGNNAAAAARPPPLAAPLPPPAAPLPPAAPLPHAPRQPGVGSTPHPGPPPPPPPASTGAKPGPPPPPPPAPAGAKPGPRPPPPPKSGMAPPRPPPSIGPKVPQPLGSKPKATEDVEADAPKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGKRQKESSSQDPSPQFIQIIDRKKSQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSEEELKLRLFSDELSRLGPADRFLKAMVDIPFAFKRMEALLFINTLKEELTATMESFAVLEVACMELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGIKAVRVAKESQSLSSVKSDDLLEDNTEETEDHYREIGLQVVSRLSSELENVKKAAVLDADSLTRTTAKLGHGLVKTRNLVNKDLKNVEEDRGFIEAVKSFVQNAEVDVMKLPEEEKKIMALVKSTGDYFHGNAGKDEGLRLFVVVRDFLIMLDKVCKEVRDAYKKQAKTLKQETSRGSSSSETRPPPSDYRQRLFPAITERRVDDHSSDDESP 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 171 252 - -
Gabi2926g00001 974 ProSiteProfiles Formin homology-2 (FH2) domain profile. 507 939 IPR015425 -
Gabi2926g00001 974 Pfam Formin Homology 2 Domain 510 913 IPR015425 -
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 360 512 - -
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 956 974 - -
Gabi2926g00001 974 Gene3D Formin, FH2 domain 512 945 IPR042201 -
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 405 495 - -
Gabi2926g00001 974 PANTHER FORMIN-RELATED 437 970 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 928 974 - -
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 366 390 - -
Gabi2926g00001 974 SUPERFAMILY Formin homology 2 domain (FH2 domain) 577 939 - -
Gabi2926g00001 974 SMART it6_source 507 928 IPR015425 -
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 182 227 - -
Gabi2926g00001 974 MobiDBLite consensus disorder prediction 933 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2926g00001 Gabi-Chr2926 20550 27779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2926g00001 489 965 FH2 protein (formin) Gene Family AT5G54650 68.542 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2926g00001 - - gmx:100793413 795.038