Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2925g00030 ATGGGGGTAGACTACTATAAAGTCCTTCAGGTAGATCGAAGTGCCAAAGATGACGATCTCAAGAAAGCTTATCGCAAGCTTGCCATGAAGTGGCATCCTGATAAGAACCCTAACAACAAAAAAGAAGCTGAAGCCAAATTCAAGCAAATCTCAGAAGCCTATGATGTTTTGAGTGATCCACAAAAGCGAGCTGTGTATGATCAGTATGGTGAGGAGGGATTGAAAGGGCAGGTGCCGCCCCCTGGCGCCGGTGGATTTTCTGGTGGAAGTGATGGCGGACCAACGACGTTCCGGTTCAACCCCAGAAGTGCAGATGATATATTTTCGGAGTTCTTCGGGTTTTCAAGCCCCTTTGGTGGAATGGGTGATATGGGTGGTGGTCGTGCTGGTGTATCTGGCTTTCCCAGGGGCATGTTTGGGGATGACATTTTCACTTCTTTTAGGAGTGGGGCTGGAGAAGGCTCTGTAGAGGAAATTCTAACTATTGAGATCAAGCCAGGATGGAAGAAAGGGACAAAAATAACATTTCCAGAGAAGGGAAATGAACAGAGAGGAATAATACCAGCAGACCTTGTTTTCATTATTGATGAGAAGCCTCATAGTGTCTTCAAAAGGGATGGCAATGATCTTGTTGTCACCCAGAAGATATCTCTTGTAGAAGCTCTGACAGGTTATACGGTGCAACTGACAACCCTCGACGGAAGGAATCTTTCGGTTTCGATCAACTCCATCATTAGTCCAACATATGAAGAAGTTATTAAAGGAGAGGGTATGCCTATTCCCAAGGAACCTTCAAAAAAGGGAAACTTGAAAGTCAAGTTCAATATCAAGTTTCCCTCCAGACTTACATCAGAGCAGAAAACTGGCATTAAGCGATTACTTACATCTTCATAA 894 0.4441 MGVDYYKVLQVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFSGGSDGGPTTFRFNPRSADDIFSEFFGFSSPFGGMGDMGGGRAGVSGFPRGMFGDDIFTSFRSGAGEGSVEEILTIEIKPGWKKGTKITFPEKGNEQRGIIPADLVFIIDEKPHSVFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRNLSVSINSIISPTYEEVIKGEGMPIPKEPSKKGNLKVKFNIKFPSRLTSEQKTGIKRLLTSS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2925g00030 297 Pfam DnaJ C terminal domain 155 279 IPR002939 -
Gabi2925g00030 297 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gabi2925g00030 297 Gene3D - 200 280 - -
Gabi2925g00030 297 FunFam DnaJ subfamily B member 13 3 122 - -
Gabi2925g00030 297 SUPERFAMILY Chaperone J-domain 3 73 IPR036869 -
Gabi2925g00030 297 CDD DnaJ 4 59 IPR001623 -
Gabi2925g00030 297 SUPERFAMILY HSP40/DnaJ peptide-binding domain 202 288 IPR008971 GO:0006457|GO:0051082
Gabi2925g00030 297 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 204 IPR008971 GO:0006457|GO:0051082
Gabi2925g00030 297 Gene3D - 131 199 - -
Gabi2925g00030 297 SMART dnaj_3 3 62 IPR001623 -
Gabi2925g00030 297 Gene3D DnaJ domain 3 124 IPR036869 -
Gabi2925g00030 297 CDD DnaJ_C 156 282 - -
Gabi2925g00030 297 Pfam DnaJ domain 4 67 IPR001623 -
Gabi2925g00030 297 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gabi2925g00030 297 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gabi2925g00030 297 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gabi2925g00030 297 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gabi2925g00030 297 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gabi2925g00030 297 FunFam DnaJ subfamily B member 13 200 280 - -
Gabi2925g00030 297 MobiDBLite consensus disorder prediction 72 98 - -
Gabi2925g00030 297 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 154 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2925g00030 Gabi-Chr2925 330244 335244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2925g00030 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 4.98e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2925g00030 K09510 - qsa:O6P43_016598 474.937