Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2925g00018 ATGGGGTCTCAAAACCAAGAACCATGGCTCTTAGAGAATGGCAATGGCAACATCAAAGGGTTGAGCAAGGAGATGAGACATGGTAGAACGGCACATAACATGTCATCATCTTCATTGCGCAAGAAATCTAACCTCAGTCTTTTGTCAAAGGTTCACTTTGTGTTCCTCAGAAATTTGCTTGTTAATTTCCAAGAGGTTATTCTTGGAACCAAGCTTTCTATTCTTTTCCCAGCCATTCCATTTGCTATCATTGGTGAATGCTATGGCTTTGCACGACCTTGGGTTTTTGCATTGAGCTTACTTGGGCTTACCCCACTTGCTGAACGAGTCAGCTTCCTCACAGAACAGGTTGCTTATTACACAGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACTGAACTCATCATAGCAATTTTTGCACTTAGTGATAACAAAATTGCTGTAGTCAAGTATTCTCTCCTTGGTTCCATCCTTTCAAACCTTCTACTGGTTCTTGGAACCTCTCTTTTCTGTGGTGGCCTTGCAAACCTTAGAAGGGAACAAAAATATGACAGGAGACAGGCAGATATGAATTTGCTTATGCTGCTTATGGCATTTTTGTGTCACTTGCTGCCAATGCTGTTCAAATATAGTGGTGCCTCAGAAGCTGTAACTGTAGACTCATCTCTGAAGTTGTCAAGAGTTGCTAGCATTGTGATGGTGATTGCATATTTTGCTTACCTTGTCTTCCAACTGTGGACTCACAGGCAATTATTTGAAGCCCAAGATGAAGATAATGAAGAGGTTGAGAATGTTTCAGAAGAAGCAGTGATAGGATTCTGGAGTGGGATTGTTTGGCTTGTTGGGATGACTGTTTTCATTGCTTTGCTTTCTGAATATGTGGTGGAAACAATTGAGGATGCATCAGAATCATGGGGTTTGTCTGTAAGCTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCTTTGGGTTCTGCAACTCAAATTAGCATGTTTGTGGTACCCTTATGTGTGATTGTTGCTTGGATTATGGGTATCAAAATGGACCTCAACTTCAACCTGATAGAGACAGGGTCTCTTGCTTTGGCAATAATAACCACAGCCTTCACATTACAGGATGGAACTTCACACTACATGAAAGGTCTTGTTCTCCTGCTATGCTACATTGTTATTGGGGCCTGTTTTTTTGTACAGAGAACACCCTTAGACCAAGCTGATGTTAATAACATAACACTTAAATCATCAACTGGTGCAGATTTTAGAGCTTAA 1353 0.4146 MGSQNQEPWLLENGNGNIKGLSKEMRHGRTAHNMSSSSLRKKSNLSLLSKVHFVFLRNLLVNFQEVILGTKLSILFPAIPFAIIGECYGFARPWVFALSLLGLTPLAERVSFLTEQVAYYTGPTVGGLLNATCGNATELIIAIFALSDNKIAVVKYSLLGSILSNLLLVLGTSLFCGGLANLRREQKYDRRQADMNLLMLLMAFLCHLLPMLFKYSGASEAVTVDSSLKLSRVASIVMVIAYFAYLVFQLWTHRQLFEAQDEDNEEVENVSEEAVIGFWSGIVWLVGMTVFIALLSEYVVETIEDASESWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVVPLCVIVAWIMGIKMDLNFNLIETGSLALAIITTAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPLDQADVNNITLKSSTGADFRA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2925g00018 450 Pfam Sodium/calcium exchanger protein 282 419 IPR004837 GO:0016020|GO:0055085
Gabi2925g00018 450 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016020|GO:0055085
Gabi2925g00018 450 NCBIfam calcium/proton exchanger 77 424 IPR004798 GO:0006816|GO:0015369
Gabi2925g00018 450 Gene3D - 123 264 IPR044880 -
Gabi2925g00018 450 Gene3D - 267 424 IPR044880 -
Gabi2925g00018 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 26 428 IPR004713 GO:0006812|GO:0008324|GO:0016020
Gabi2925g00018 450 FunFam Vacuolar cation/proton exchanger 269 425 - -
Gabi2925g00018 450 NCBIfam calcium/proton exchanger 58 424 - -
Gabi2925g00018 450 FunFam Vacuolar cation/proton exchanger 123 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2925g00018 Gabi-Chr2925 177226 181310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2925g00018 7 429 Antiporters AT2G38170 72.326 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2925g00018 K07300 - gmx:100782052 683.715