Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2925g00005 ATGGCCACCGCAACCGCGGCAGCTACTTCATCCTTCATCGGAACACGTCTCCGAGAAGTGCACTCTAATTCGGGTCGGGTACAAGCCAGGTTCGGGTTCGGATCAAAGAAAACCGCCCCGGCTAAGAAATCGGCGAGGCCAGGTCCGGGTTCGGATCGGCCTTTGTGGTACCCGGGAGCGAAGGCGCCGGAATGGCTCGACGGAAGCCTCGTCGGCGATTACGGTTTCGATCCTTTCGGTCTGGGGAAGCCGGCGGAGTATCTGCAGTTCGATCTGGACTCGCTTGACCAGAACCTGGCGAAGAACCTCGCCGGAGATGTGATCGGGACAAGAACGGAGTTTGCGGACGTGAAATCGACGCCGTTTCAGCCGTACAGCGAGGTTTTCGGCCTTCAGAGGTTCAGAGAGTGCGAACTCATCCACGGAAGGTGGGCCATGCTCGCCACGCTTGGCGCCCTCACCGTCGAGGGGGTCACCGGAGTTACCTGGCAAGACGCCGGGAAGGTGGAGCTAGTAGAAGGATCAAAATACCTTGGGCAACCACTTCCATTCTCAATTACAACATTGATTTGGATTGAAGTTCTGGTGATTGGATACATCGAGTTCCAGAGGAATGCTGAGCTTGACCCAGAGAAGAGGTTATACCCAGGTGGCAAGTTCTTCGACCCTCTTGGTTTGGCCTCAGACCCTGAGAAGAAAGCCACACTTCAATTGGCAGAAATCAAGCATGCACGTCTTGCAATGGTTGCATTCCTTGGCTTTGCAGTTCAAGCTGCTGCCACTGGCAAAGGTCCTCTTAACAATTGGGCTACCCATTTGAGTGACCCTCTTCACACAACCATCATTGATACCTTCTCTTCTTCCTCTTGA 870 0.5448 MATATAAATSSFIGTRLREVHSNSGRVQARFGFGSKKTAPAKKSARPGPGSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEGVTGVTWQDAGKVELVEGSKYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2925g00005 289 Pfam Chlorophyll A-B binding protein 62 258 IPR022796 -
Gabi2925g00005 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 284 IPR001344 GO:0009765|GO:0016020
Gabi2925g00005 289 SUPERFAMILY Chlorophyll a-b binding protein 49 286 - -
Gabi2925g00005 289 MobiDBLite consensus disorder prediction 32 54 - -
Gabi2925g00005 289 Gene3D Chlorophyll a/b binding protein domain 56 289 - -
Gabi2925g00005 289 FunFam Chlorophyll a-b binding protein, chloroplastic 101 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2925g00005 Gabi-Chr2925 66565 69332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2925g00005 12 288 Chloroplast and Mitochondria Gene Families AT3G08940 85.252 3.38e-174 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2925g00005 K08915 - gmx:100785180 527.709