Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2923g00034 ATGAGAATGTTGCCTGTTTGCTCAGCCACCCCGAGCTATTCCTCATCTTCTTCCCAGATTCCCTTGTTTGGGGGATTGCACCCCCTTTACCCAACTCGAAAGGATCTTGAGAGCAGATGTGTGGCAGAAGAAGGTTTACATCTGGGTTTGCAACATGGAACTCACTCCCTGAGAAATTCATTTAAAGCACAAGCTACAAAGGCTGTTTCACTCTCACCAGTGACAACAGATTCGTATCATTCACTGAGTAATGGAGAACTCAGATGCACAGAAAGTTATAATTTATCTATTGTGCCAGAGGAATTGGTGGACTTTGCAGAACAGTCAACTGAAGGATCTAATACATTAGTGGCACCAGCACAACCAGGAACACTGTCTAGTACTGATATAATACCAGAGAAATTTGCACCTGTACCTAGTTCAGTTAACGTGGACGATGAATCGTTAGCCAGTACAAAAGCAAGTGTCGGTGACGTTTTTGCTGGGGTCAATGAGTCATTCAATGCCTCAATTAATAAAGGAGAAAATGCTTTACGAAGCTCACTGGATACAGCCACTTCTTTTATAGATTCTATAGTAAAAAATGCTACTAAATCTGCAGATAATGCTTTCGGTAAGGCATTTTCTGCTGTTGATCAGACAGGAGAATTAGCAAATAAGAAATTTACTAGCTTTTCCAGTGAGCTAAGTGGAATGACAAATAAAGCACCTGCTGCGGCTATTGATGTGTTGCGCCACACAATCATAACAGTAGAGAGTTCTCTAGCAAGTGGGGTTTCATATGTTGTCTACCTATATGGGTCAGCCAAGGAGCTCCTTCCTGCTGGGATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGTCCTATAGGGTCTGCATCTCAAAAGATATACATGTCTGTATATTCATTGGAGAAAAGTCTTGGCTTGGACCCAAATGAACCAATCATTCCGTTTGTTGTTTTTTTGGGCTCTTCAGCTACGTTCTGGGCTATTTATTGGCTGTGGACATATGGAGGTTACTCAGGAGATCTATCCCCTAAATCAGCTTTGGAGCTTTTAGCTGGGGACACAAATGCTGCACTTATAGATGTTCGCACTGAGGATTTACGAGAAAAAGATGGTATTCCTGATCTTCGACGGTCTGCTCGGTTTCGATATGCATGTATAACTCCACTTGAGGTTGATGGCTCAATGCGCAAGTTGTTGCAGAGTGGTAGAGACCTCGATGACTCCTTGATCGCTGTTATCATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGCATCAAGAATCCATACTTGGTTCAAGGTGGCTTTCAGTCTTGGATGAAACAAGGTCTCCGCATCAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTTTGCAACTTTTAGGTTATGGTACGGTACTTATTGCAGGTTTGTATGCATTATCAGAGTGGGAGAAGACATTACAGTTAATTGGTGCATTTGGCCTTAGTTTGACCATCTATCTCCGGGTTTCTTCATATGAAGACTCAGAAGACCTGAATCAAGATGTGAGGTTGTTGCTTGCTCCTGTTAAACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGTAAATTGGAATCAAATCGCATAGGGCTACCTACGTCACCTTCATCGTTAGATGTTCAGAGCAGGGTGTTGCAGGCTGCTGCTAAACATGAATCCCAACCATCTGATAGTGAAGTTAACCAAGATCCAGTTCCTGAATCGACAGTTCCTCTCAATCAGAATGTGTGA 1893 0.4247 MRMLPVCSATPSYSSSSSQIPLFGGLHPLYPTRKDLESRCVAEEGLHLGLQHGTHSLRNSFKAQATKAVSLSPVTTDSYHSLSNGELRCTESYNLSIVPEELVDFAEQSTEGSNTLVAPAQPGTLSSTDIIPEKFAPVPSSVNVDDESLASTKASVGDVFAGVNESFNASINKGENALRSSLDTATSFIDSIVKNATKSADNAFGKAFSAVDQTGELANKKFTSFSSELSGMTNKAPAAAIDVLRHTIITVESSLASGVSYVVYLYGSAKELLPAGIRDTVNVYEDKATEILSPIGSASQKIYMSVYSLEKSLGLDPNEPIIPFVVFLGSSATFWAIYWLWTYGGYSGDLSPKSALELLAGDTNAALIDVRTEDLREKDGIPDLRRSARFRYACITPLEVDGSMRKLLQSGRDLDDSLIAVIIRNLKIVKDSSRVIVLDADGTRSKGIARSLRKIGIKNPYLVQGGFQSWMKQGLRIKELKPETALSILNEEAEAILEDVSPSPLQLLGYGTVLIAGLYALSEWEKTLQLIGAFGLSLTIYLRVSSYEDSEDLNQDVRLLLAPVKLGAQAFSWAAGKLESNRIGLPTSPSSLDVQSRVLQAAAKHESQPSDSEVNQDPVPESTVPLNQNV 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2923g00034 630 SMART rhod_4 351 476 IPR001763 -
Gabi2923g00034 630 MobiDBLite consensus disorder prediction 598 630 - -
Gabi2923g00034 630 ProSiteProfiles Rhodanese domain profile. 361 479 IPR001763 -
Gabi2923g00034 630 CDD RHOD 355 470 - -
Gabi2923g00034 630 Gene3D - 346 500 IPR036873 -
Gabi2923g00034 630 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 3 627 IPR044690 GO:0009704|GO:0071277|GO:0090333
Gabi2923g00034 630 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 336 478 IPR036873 -
Gabi2923g00034 630 Pfam Rhodanese-like domain 352 472 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2923g00034 Gabi-Chr2923 317492 325329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2923g00034 323 440 Sulfurtransferasese or Rhodanese AT5G23060 29.365 8.08e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2923g00034 - - gmx:100786123 1008.05