Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2918g00001 ATGGCATACGACAACAACGTTGATCTCTGTACTCATTTATCACTTGCTAGGTGTCCTTGTAATACAATGGTGTGTACCCATTTGTCACTTGGTAAGTGTCATTGCAACACAACCAATGAAGATGTCTTTGTTTCTTTAACCAAGAAGAGGAAGATTTCTGAAGAAACCTCTGTTGCTGCAAGAAAGAAGGTTTGTGGAGAGAGAAGTTGGGGTTACTCAACCGATTTGATGTTTTGTGATGATCCCTGGAAGATCAAGAAAGTCCTCATTTGCAGTGATCTTGGCAACATGAGCAGGCTCTTGCTCCCTAAAGATTTGGCTGAGAATTTGGTGGTTCCGGTGTTGGATGGTGATGTTGAAAAAGGTGTTCAAGTTGAGATTTGGGATGTGGACACTGCCTCCATTCATTCTTTAGTTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGGAATTGGGTTAAAGATTTTGTATCAAGAAGAGGCTTAAAGAAAGGGGATGAGATAGGCCTTCATTGGGATCCATACAATAATCGCTTTGATTTCTCTGTTCTTGATGCCATTTAG 573 0.4031 MAYDNNVDLCTHLSLARCPCNTMVCTHLSLGKCHCNTTNEDVFVSLTKKRKISEETSVAARKKVCGERSWGYSTDLMFCDDPWKIKKVLICSDLGNMSRLLLPKDLAENLVVPVLDGDVEKGVQVEIWDVDTASIHSLVFKKWVSSRSYVFIGNWVKDFVSRRGLKKGDEIGLHWDPYNNRFDFSVLDAI 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2918g00001 190 Gene3D - 82 185 IPR015300 -
Gabi2918g00001 190 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 49 188 - -
Gabi2918g00001 190 CDD B3_DNA 83 188 IPR003340 GO:0003677
Gabi2918g00001 190 SUPERFAMILY DNA-binding pseudobarrel domain 81 186 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2918g00001 Gabi-Chr2918 8279 8851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2918g00001 57 176 B3 DNA Binding Superfamily AT3G24650 29.508 7.23e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2918g00001 - - aprc:113850604 214.157