Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi290g00005 ATGGCGGGGAAGTCTGACTCAGTGTCGATCCGAGTTCCCTACAAGAACCTCAGGAACGATTCTTCTGCTGCAGAAGTGGAACTCGTCGGCGTCGAGGACGATCCTCGCCACCGGATCGACCTTAATTCGCCGTCTTCTAATGGATCTCCCAATCACTTGCCGGCGAAGAATAACGCCACCTTAATGAATCTGGTTCTCAGTTGCACCGTCGCCGCCGGCGTTCAATTCGGATGGGCCTTGCAGCTTTCTCTTTTGACCCCCTACATTCAGACATTGGGAATAGGACATGCGTTCTCTTCATTTATCTGGCTTTGTGGCCCCATTACAGGTCTTGTGGTTCAACCCTGTGTTGGTATTTGGAGTGATAAATGTACTTCAAAGTTTGGCAGAAGACGTCCATTCATTCTGGCAGGATCTCTTATGATCTCTGTGGCTGTGATATTAATCGGGTATTCCGCAGACATTGGATATGTATTAGGGGATACAAATGAGCATTGCAGAACATTTAAAGGGACCCGAACAAGGGCTGCCCTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCCAACAACACAGTTCAGGGGCCAGCTCGAGCACTTTTGGCTGATCTGTCGGGTCCGGATCAACGCAATGTAGCAAATGCTATATTTTGCTCATGGATGGCAGTCGGAAACATCCTAGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCCTGACAAATAGAGCTTGCTGTGAAGCCTGTGGCAATCTTAAAGCAGCATTTCTTGTTGCTGTGGTGTTTCTGACATTATGCACCCTTGTGACCTTATATTTTGCTGATGAGGTTCCACTTACAACTGAGAGTCAGCATCATCGCTTATCAGATTCTGCTCCTTTATTGGATGAACAACAACAAAATGGCATTGAATTTTCAAAATCAAAGCCTTTACCTGTTATCAATGAATTCAATGGCAAGATGAGTGAGGATAACATTGAGAACGATGTAGAGATGAAGCATGAGAATTTCAAAGACGGGGAAGATCATACTGAAAATTTAATGGATGGGCCTGGGGCAGTAATGGTAAACTTGTTGACCAGTTTGAGGCACTTGCCACCTGCTATGCATTCAGTGCTTGTTGTAATGGCTCTTACTTGGTTGTCATGGTTTCCCTTTTTTCTATTTGATACGGATTGGATGGGGAGAGAAGTTTATCATGGGGATCCTAAAGGGAACTCTTCTGAAATAGATCTTTATGACCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTCCTTGGAATTAGCTCTTTCTTAATTGAACCAATGTGTAAGTGGATGGGTGCAAGATTATTATGGGCAGTGAGCAATTTTATCGTCTTTGTTTGCATGGCTGGCACTGCTGTCATTAGTCTACTTTCCATCCGAGATTATTCTGGAGGGATAGAACACGTAATTGGAGCTAGTGAAACAATCAAGGTTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCAATTACCTATAGTGTTCCCTTTGCGGTCACAGCAGAGTTGACTGCTGATTCAGGTGGTGGCCAAGGATTGGCTATAGGAGTTCTAAATCTTGCAATTGTCGTTCCACAGATGATTATATCCCTTGGTTCTGGTCCATGGGATGCTCTTTTTGGCGGCGGCAATATTCCTGCTTTCGTTTTGGCTTCCTTCTGTGCTCTTGTGGGCGGTATTATTGCAACTCTCAAACTGCCAAATTTGTCTAGCAGTTCCTTCAAGTCATCAGGATTTCATATTGGCTAG 1812 0.4437 MAGKSDSVSIRVPYKNLRNDSSAAEVELVGVEDDPRHRIDLNSPSSNGSPNHLPAKNNATLMNLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSKFGRRRPFILAGSLMISVAVILIGYSADIGYVLGDTNEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAVGNILGYSSGASGKWNKWFPFLTNRACCEACGNLKAAFLVAVVFLTLCTLVTLYFADEVPLTTESQHHRLSDSAPLLDEQQQNGIEFSKSKPLPVINEFNGKMSEDNIENDVEMKHENFKDGEDHTENLMDGPGAVMVNLLTSLRHLPPAMHSVLVVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNSSEIDLYDQGVREGAFGLLLNSVVLGISSFLIEPMCKWMGARLLWAVSNFIVFVCMAGTAVISLLSIRDYSGGIEHVIGASETIKVASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQMIISLGSGPWDALFGGGNIPAFVLASFCALVGGIIATLKLPNLSSSSFKSSGFHIG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi290g00005 603 Pfam MFS/sugar transport protein 79 228 - -
Gabi290g00005 603 SUPERFAMILY MFS general substrate transporter 64 589 IPR036259 -
Gabi290g00005 603 Gene3D MFS general substrate transporter like domains 58 586 IPR036259 -
Gabi290g00005 603 FunFam Sucrose transporter SUC2 62 286 - -
Gabi290g00005 603 PANTHER SUGAR TRANSPORTER 59 585 - -
Gabi290g00005 603 Coils Coil 14 34 - -
Gabi290g00005 603 CDD MFS_SLC45_SUC 64 583 - -
Gabi290g00005 603 FunFam Sucrose transport protein SUT5 375 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi290g00005 Gabi-Chr290 124346 132262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi290g00005 147 603 Sucrose Transporter Gene Family AT2G02860 70.678 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi290g00005 K15378 - gmx:100793185 1039.25