Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00031 ATGAGTCTGGACAAGAATCCTCGTGTATTTTTTGATGTCTCGATTGATGGGGACCCTGTGGAAAGAATTGTTATTCAGCTTTTTGCCAGTATAGTTCCTAAGACAGCTGAGAATTTCCGGGCGCTTTGTACAGGTGAAAAGGGCATTGGAGAATCTACTGGAAAACCTTTGCATTATAAAGGGACAACTTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAAGGGTAATGGCACTGGTGGAGAAAGTATATATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTAACACATGAAGGACCCGGTTTTCTTTCTATGGCAAATAGTGGTCCTAACACAAATGGGTCTCAGTTCTTTATTACATTCAAGCGCCAGCCTCATCTTGATGGGAAGCATGTTGTTTTTGGTAAAGTTGTCAAGGGAATGGACACTCTGAAGAAAATTGAGCAGGCGGGAACATCTGATGGGAAACCTACCCAACCAGTTAAAATTATTGATTGTGGTGAAATGTCTGAAACAAAAATTCAGCTCACAGTCGAGAAGGAGAAAGTGAAAAGGAGAAAATCAGGGAAATCCCTAACTTCTGATGATAGTTCTGACAAAAAATCAAGGGTAAAGAGAAAAAAATCTTCCAAAGACACAAGGAAGAAAAGGAGGAGATACTCAACATCTGATAGTGATAGTGGTAGTGATAGTTATTCCTCAGATTCTGAGTCAGATTCAGCTTCAGATTCTGAATCGGATTCTGATTCAAGTTCCTCTAGTTATGGGAAACACAGGAAGAGGAAGAGAAATAAGCGCAAGCATGGGAAGAAGAGGAGAATTGGACGTAAGCAGAGAAGGAAAAGCCAGCACGGTAGAAGCAGAAGATCAAGACCCAAGTCCAGATGGAGCTCAGATGGTTCAAGTGATAAAGAAAGTGAGAGATCTAGTGCTAGGGGCAGTAGTTCTGGTGATGAGAAAGCTGATCACTCTGGTCGTAAAACACATGCTGACAATAATGCACAAACAAATCTAGACACAGGAAAGCAACCATCTAGCCCTCCCCCACAAAGTCAAACTATTCCAGAACAAGGAATGGATCCCAAGGTTAAAAGAACTGGGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGTGCATTTCTGAATAACGGGCATGATACTCAAGCTGAATTTAGTAAACCTTCTAAGCAACATGCTTATTCAGATGATTCGAATCACAATAGAGGTGCAAGTCCTGGAAGAAGTCCTGCTAGGAGTCCTACTAGGAAGTCTGTGGAGCTGAACAAAGGACGTCCTTTATTGGCTAGTACTGGCCAAAAAGCATCTGAACCTGCTGCCTCCAAACATAGTCAGGGCTTTTCGAAAAGCCCTTCACCAAATGGCATGCCTAAGCGTATTAAAAAAGGACGCGGCTTTACCGAGCGCTATGCTTTTGTACGCAGATATCGTACTCCTTCTCCAGAGCGGTCTCCCCGAACATATCGTTATGGTGATAGAAATATAAGGAGGAACTTTGATAGAAATACAAGCTACAGAAGTTATTCTGAGCGCTCGCCACCAAGACGATTTCGGAGCCCACCAAGGGGCAGGAGCCGTCCAAGATACCAAAGCAGAAGAAGTCGGAGTAGGAGCATCTCCCGCAGTCCAGTGCGTGGCCGGTATAGAGACCGAGGCCGCAGCCAGAGTCCAGTACGCAGTCTTAGTCCTGAAGACAGGCGGCCTCCGATAAGTGACAGATTAAAATCCCGACTTGGTCCTCGAAGTGATGAACAATCTCCAGACAGAGGGAGGTCAAAGTCCAATTCTAGGAGCAATGGCTCTTCTCGCTCCAGATCCCCTGATGCTACACCACCAAAGCGTTTTGATAAAAGGACTTCCGTATCTCGTAGCAGGTCTAGATCGAGCTCTTCATCCGGACAAAAGGGTTTAGTTTCTTATGGAGATGGTAGTCCTGATTCTATTGCGAGGTAG 2001 0.4398 MSLDKNPRVFFDVSIDGDPVERIVIQLFASIVPKTAENFRALCTGEKGIGESTGKPLHYKGTTFHRIIKGFMAQGGDFSKGNGTGGESIYGGKFADENFKLTHEGPGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVKGMDTLKKIEQAGTSDGKPTQPVKIIDCGEMSETKIQLTVEKEKVKRRKSGKSLTSDDSSDKKSRVKRKKSSKDTRKKRRRYSTSDSDSGSDSYSSDSESDSASDSESDSDSSSSSYGKHRKRKRNKRKHGKKRRIGRKQRRKSQHGRSRRSRPKSRWSSDGSSDKESERSSARGSSSGDEKADHSGRKTHADNNAQTNLDTGKQPSSPPPQSQTIPEQGMDPKVKRTGDKQSHEEGELSPENGAFLNNGHDTQAEFSKPSKQHAYSDDSNHNRGASPGRSPARSPTRKSVELNKGRPLLASTGQKASEPAASKHSQGFSKSPSPNGMPKRIKKGRGFTERYAFVRRYRTPSPERSPRTYRYGDRNIRRNFDRNTSYRSYSERSPPRRFRSPPRGRSRPRYQSRRSRSRSISRSPVRGRYRDRGRSQSPVRSLSPEDRRPPISDRLKSRLGPRSDEQSPDRGRSKSNSRSNGSSRSRSPDATPPKRFDKRTSVSRSRSRSSSSSGQKGLVSYGDGSPDSIAR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 414 432 - -
Gabi2909g00031 666 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Gabi2909g00031 666 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 640 654 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 231 257 - -
Gabi2909g00031 666 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 581 607 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 534 558 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 183 209 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 625 639 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 336 363 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 608 624 - -
Gabi2909g00031 666 CDD cyclophilin_ABH_like 7 173 - -
Gabi2909g00031 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gabi2909g00031 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Gabi2909g00031 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Gabi2909g00031 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Gabi2909g00031 666 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 450 468 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 390 405 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 183 666 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 298 335 - -
Gabi2909g00031 666 Gene3D - 1 182 IPR029000 -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 262 297 - -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 367 382 - -
Gabi2909g00031 666 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 175 - -
Gabi2909g00031 666 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 173 IPR002130 GO:0000413|GO:0003755
Gabi2909g00031 666 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Gabi2909g00031 666 MobiDBLite consensus disorder prediction 477 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00031 Gabi-Chr2909 329933 335938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2909g00031 25 171 U-box Gene Family AT5G67530 48.322 9.31e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00031 K09566 - gmx:100791082 797.734