Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00029 ATGACGAAGGAGAACTTGGAAAAACACATTAAGAAGCAGATGGGATGCATGACAGGTTTCCTTCAAATCTTCGATCGTCACCACCAGATGATCGCCGGAAAACGCATCTACTCGCCCAAAAGGCTCCCTCCTTCTCCGCCTCCGGAAACTCATTCGTCGCCTGAAACAGACATATGCGATGGATCTCCGGCGGAATCATCATCACCGGAGACAGAGATAGAAAAAACTCAAGCTGTAAAGTTGTCTCCTCTTCTTCCACTTCCAGTTTTGCAATTCAATGAAGGAACGAGGTCTTCCTGGAAGTTCTCCAGAGAATCTCCGAGACTATCGTTGGATAGCAGAGCAGTTGTGGATGCCAAAGGAACCTTCCACCCGAGAGAGGCGGATAAGCAGCAGCAACTGCAGCGGCGATCCACCACCAGTGTCGTTGCAAGGCTCATGGGGCTTGAGGATTCGGATCCTCAGCTACGAAGATCCGCTTCCGAATCCAGGGTTTCCAGAGATCTACCCCAACAGTATCGTTTCTTCGACACCACCAACAACTTCCAGTTAAAGCAACAGCATGTTGATAATAATAATGGCAGAGCCTCAGATCCAAACGCGAAAGCAGAGCCTGCAAGGGGAATAAGACAAAAGAAGAGTTTCTACGATTCCGCTGACTTTTTCCCAGACCCGAAGCACAGTGTTTCTGTGTACGGAGAAACGAAGCTGCGAGGGATCGATGAACCTTCCAAGGATCTCGACACTATGAAGCAAATCCTCGAGGCCTTGCAGCTCAAGGGCCTTTTGCATTCCAATAAATCCGTAACTCAAACCAACCACAGGAACTTCGTCTTCGACGGAACCATATCCGGGAACGATTCTCCCATTGTTGTTATGAAGCCCGCAAGATCTTCCGGTTTGTTTAATCGAACCGGAAATGATTCTCAACCAGGACCTCGAGCTCGCCGCAACAACGAAACCCTTCCTGCTAGACCGGAAACAGATCGAAATGCCAGAGGCAGAAATGTGAACTCGCCCACGCGCAGCCCGAACCGGATGAGGAAAGTGAATGATGGTGTTGAACCCAGAACCGGAGTTTCTCATACTCCGGTTCATTCATCCAAGTTAAACTCGAGAAGCAATGGACCTGGTCAGCAAGTAACAAGTAGATCGCCGAGGATGAGAAAAGCGGTCACTTATCAAAAGGAGGAGAAGTTGATGGTTATGGCAGAGGATGAATCATCCAACGTTTCAGAAAGCAGCTTCAGCATTTCTTCATACACCGATACAGAGAGGTTTAAGATGGAGGAATACAGGGAAGGGAAGAATCTGTTGCAGAGGTGTGATGAGCTGCTGAACAGCATAGCGGAAATGACGGCAGCGGCGGAGCAACAACCGAGTCCAGTATCGGTACTTGACTCGTCGTTTTACAAGGACGAGTCGTCGAACTCACCATCCCCGGTAATGAAACGGTGCATTGATTACAAAGATCAAGCAGCGGAGTCAGAAGATGATGTGTGGAGTGCAGCTTGGTGTTGCAGCGAAGCCATGTCCGAGGATAGCGATTTCGTTTATGTTTCGGAAATACTGCATGCTTCTAATTACTTGCTGGCAGACAGCGACCTTTTTCTGTTACTGGAGAAGCGGCAGTACCTCAAGGGGAACGACACCTCCAGGAGCTCCACTTTCCAAAGACGGTTGATCTTCGACACCATTCACGAGATCCTCGACCGGAACCGGCGTTTTCCGCCGTGGAAGGCGGTTTCCTGGGCGGAGAACACGCAGCTGTTGCGTCGGATCTGGTCGGAGTTTCGGAGGATCCGAGATAGGGAGGAGTCGGAGGACCTGTTCGCGGTGATATGCGGTGTGTTGAGGAAGGACATGGCGGAGGACGCCACCATGAATGAATGGGGAGAATGCCCCGTGGAGATGGGGGATGTAGTGCTGGACATCGAACGCTCCGTATTCAAAGATCTCATCGTCGAAACCATTCGAGATCTCGCGTCGTTTAAGGGACAAAGACAACGTAATAAAATCGCGGCGCTTCGTAGGAAGTTGGTGTTTTGA 2049 0.5012 MTKENLEKHIKKQMGCMTGFLQIFDRHHQMIAGKRIYSPKRLPPSPPPETHSSPETDICDGSPAESSSPETEIEKTQAVKLSPLLPLPVLQFNEGTRSSWKFSRESPRLSLDSRAVVDAKGTFHPREADKQQQLQRRSTTSVVARLMGLEDSDPQLRRSASESRVSRDLPQQYRFFDTTNNFQLKQQHVDNNNGRASDPNAKAEPARGIRQKKSFYDSADFFPDPKHSVSVYGETKLRGIDEPSKDLDTMKQILEALQLKGLLHSNKSVTQTNHRNFVFDGTISGNDSPIVVMKPARSSGLFNRTGNDSQPGPRARRNNETLPARPETDRNARGRNVNSPTRSPNRMRKVNDGVEPRTGVSHTPVHSSKLNSRSNGPGQQVTSRSPRMRKAVTYQKEEKLMVMAEDESSNVSESSFSISSYTDTERFKMEEYREGKNLLQRCDELLNSIAEMTAAAEQQPSPVSVLDSSFYKDESSNSPSPVMKRCIDYKDQAAESEDDVWSAAWCCSEAMSEDSDFVYVSEILHASNYLLADSDLFLLLEKRQYLKGNDTSRSSTFQRRLIFDTIHEILDRNRRFPPWKAVSWAENTQLLRRIWSEFRRIRDREESEDLFAVICGVLRKDMAEDATMNEWGECPVEMGDVVLDIERSVFKDLIVETIRDLASFKGQRQRNKIAALRRKLVF 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00029 682 PANTHER LONGIFOLIA PROTEIN 1 68 IPR033334 GO:0051513
Gabi2909g00029 682 Pfam Domain of unknown function (DUF4378) 516 656 IPR025486 -
Gabi2909g00029 682 MobiDBLite consensus disorder prediction 37 73 - -
Gabi2909g00029 682 MobiDBLite consensus disorder prediction 55 73 - -
Gabi2909g00029 682 MobiDBLite consensus disorder prediction 296 390 - -
Gabi2909g00029 682 MobiDBLite consensus disorder prediction 361 389 - -
Gabi2909g00029 682 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00029 Gabi-Chr2909 298454 302283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2909g00029 364 682 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 43.385 5.49e-69 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00029 - - lang:109346664 677.937