Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00023 ATGGAGACGCACGGCGGAGGAACCCTCCGTTACCGCAGCTCTCAGTCCCCTTCACCTTCCCACTCCGCTTCCGCCTACGCCACCTCTTCCATCCACAAGCGCAAGCGCGCGTCTGATGACCACGCGCCTCCCTTTCCCCCTTCTTCCTTCTCCGCCGACACGCGCGACGGCGCCCTCACCTCCAATTACGACCTCGAGAGCATCTCCGCCCGCGGCGCCGACTACGACAACGATTCCTCCATGCGCACCTTCACCGCTGCAAGGCTCAGCAACCCTCCCTCCGCTCCACGCAACACCAAGCTCAAGACCGATAATTCCAACGTTAAGATCGAGAATTCCGATGGCGCCAAAGACGCCGCACCCGCCGGGACTGGTGCCGTCGGCGCCGCCGCCACCGGCGGCTCCGTCCCCGGCATCGTGGTTAAGGAGGACGCAACTAAGATATTTACTGATAATTTACAAACTAGTGGTGCTTACAGCGCTAGGGAAGAGAGTCTCTGGAGAGAGGAGGAAGCAGGAAGGCTCAAATTCGTATGCTATTCGAATGATGGCATTGATGAACATATGATTTGGTTGATAGGATTGAAGAATATATTTGGTAAGCAACTTCCAAATATGCCCAAGGAGTACATTGTCCGACTTCTTATGGATAGGAGTCATAAGTCTGTAATGGTCATAAGGCGTAATCATGTTGTTGGAGGCATTACATATCGCCCATATGCAAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAAGGTTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCACGTGATAAAGATGGGTTGACACATTTTCTCACATATGCTGACAATCATGCTGTTGGCTATTTTATCAAACAGGGATTTACAGAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGACGGGGGGATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCTTACACTGAATTGTCACCTATGATCCGTCGTCAAAGGCAGGCAATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCACATTGTTTATACTGGAATTGATTTTCAGAAGAAAGAAGCTGGTATTCCCAAAAAAATTATTGAGGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAACTTATCATAATTGA 1218 0.4869 METHGGGTLRYRSSQSPSPSHSASAYATSSIHKRKRASDDHAPPFPPSSFSADTRDGALTSNYDLESISARGADYDNDSSMRTFTAARLSNPPSAPRNTKLKTDNSNVKIENSDGAKDAAPAGTGAVGAAATGGSVPGIVVKEDATKIFTDNLQTSGAYSAREESLWREEEAGRLKFVCYSNDGIDEHMIWLIGLKNIFGKQLPNMPKEYIVRLLMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDKDGLTHFLTYADNHAVGYFIKQGFTEEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTELSPMIRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKIIEDIPGLREAGWTPDQWGHSRFRTYHN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00023 405 Gene3D - 171 335 - -
Gabi2909g00023 405 Pfam Acetyltransferase (GNAT) family 221 300 IPR000182 GO:0016747
Gabi2909g00023 405 PANTHER GH11602P 97 399 IPR037800 GO:0004402
Gabi2909g00023 405 MobiDBLite consensus disorder prediction 8 31 - -
Gabi2909g00023 405 FunFam Histone acetyltransferase KAT2A 172 336 - -
Gabi2909g00023 405 CDD NAT_SF 222 277 - -
Gabi2909g00023 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 188 330 IPR016181 -
Gabi2909g00023 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 175 329 IPR000182 GO:0016747
Gabi2909g00023 405 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00023 Gabi-Chr2909 225270 240799 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi2909g00023 Acetyltransf_1 1.7e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00023 K06062 - gmx:100791610 687.182