Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00021 ATGGAGACGCACGGCGGAGGAACCCTCCGTTCCCGCAGCTCTCAGTCCCCTTCACCTTCCCACTCCGCTTCCGCCTCCGCCACCTCTTCCATCCACAAGCGCAAGCTCGCGTCTGATGACCACGCGCCTCCCTTTCCCCCTTCTTCCTTCTCCGCCGACACGCGCGACGGCGCCCTCACCTCCAATGACGACCTCGAGAGCATCTCCGCCCGCGGCGCCGACTCCGACTCCGATGACGACTCCGAGGACGCCGTCGTGGACGACGACGAGGACGACTACGACAACGACAACGATTCCTCCATGCGTACCTTCACCGCTGCAAGGCTCAGCAACCCTCCCTCCGCTGCACGCAACACCAAGCTCAAGACCGATAATTCCAACGTTAAGATCGAGAATTCCGATGGCGCCAAAGACGCTGCACCCGCCGGGACTGGTGCTGCCGGCGCCGCCGCCACCGGCGGGTCCGTCCCCGGCATCGTGGTTAAGGAGGACGCAACTAAGATATTTACTGATAATTTACAAACTAGTGGTGCTTACAGCGCTAGGGAAGAGAGTCTCAGGAAAGAGGAGGAAGCAGGAAGGCTCAAATTCGTATGCTATTCGAATGATGGCATTGATGAACATATGATTTGGTTGATAGGATTGAAGAATATATTTGGTAAGCAACTTCCAAATATGCCCAAGGAGTACATTGTCCGACTTCTTATGGATAGGAGTCATAAGTCTGTAATGGTCATAAGGCGTAATCATGTTGTTGGAGGCATTACATATCGCCCATATGCAAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAAGGTTATGGTACCAGATTGATGAATCACTTAAAACAGCATGCACGTGATAAAGATGGGTTGACACATTTTCTCACATATGCTGACAATAATGCTGTTGGCTATTTTATCAAACAGGGATTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGGGGGATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCTTACACTGAATTGTCACCTATGATCCGTCGTCAAAGGCAGGCAATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCACATTGTTTATACTGGAATTGATTTTCAGAAGAAAGAAGCTGGTATTCCCAAAAAAATTATTGAGGACATCCCTGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAGCTTTAAGTGGTTCCACCGACAGTTTGACTGCGTTTATGCGTTCCCTTCTAAAGTCAATGCACGATCATGCTGATGCTTGGCCATTCAAGGAACCAGTTGATGCACGGGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGACTAAGAGGGTGGAGTCAGAGCAATATTACGTCACATTTGAGATGTTTCTTGCGGATGTCAGAAGAATGTTTGCGAATGCACGCACTTATAATTCTCCAGAAACCATTTATTACAAATGTTCTACAAGGCTTGAAACTCACTTTCAAAGTAAGGTGGCATCGGGCCTCCAGCTCCAGTCTGGTTCCAAAATTCAGTAG 1623 0.48 METHGGGTLRSRSSQSPSPSHSASASATSSIHKRKLASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEDDYDNDNDSSMRTFTAARLSNPPSAARNTKLKTDNSNVKIENSDGAKDAAPAGTGAAGAAATGGSVPGIVVKEDATKIFTDNLQTSGAYSAREESLRKEEEAGRLKFVCYSNDGIDEHMIWLIGLKNIFGKQLPNMPKEYIVRLLMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDKDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTELSPMIRRQRQAIDEKIRELSNCHIVYTGIDFQKKEAGIPKKIIEDIPGLREAGWTPDQWGHSRFRALSGSTDSLTAFMRSLLKSMHDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMTKRVESEQYYVTFEMFLADVRRMFANARTYNSPETIYYKCSTRLETHFQSKVASGLQLQSGSKIQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00021 540 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 209 350 IPR016181 -
Gabi2909g00021 540 CDD Bromo_gcn5_like 429 527 - -
Gabi2909g00021 540 ProSitePatterns Bromodomain signature. 447 505 IPR018359 -
Gabi2909g00021 540 MobiDBLite consensus disorder prediction 1 32 - -
Gabi2909g00021 540 CDD NAT_SF 242 297 - -
Gabi2909g00021 540 PANTHER GH11602P 49 534 IPR037800 GO:0004402
Gabi2909g00021 540 PRINTS Bromodomain signature 459 475 IPR001487 GO:0005515
Gabi2909g00021 540 PRINTS Bromodomain signature 445 458 IPR001487 GO:0005515
Gabi2909g00021 540 PRINTS Bromodomain signature 494 513 IPR001487 GO:0005515
Gabi2909g00021 540 MobiDBLite consensus disorder prediction 76 96 - -
Gabi2909g00021 540 Pfam Bromodomain 435 517 IPR001487 GO:0005515
Gabi2909g00021 540 MobiDBLite consensus disorder prediction 53 68 - -
Gabi2909g00021 540 MobiDBLite consensus disorder prediction 1 154 - -
Gabi2909g00021 540 Gene3D - 191 355 - -
Gabi2909g00021 540 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 195 349 IPR000182 GO:0016747
Gabi2909g00021 540 SMART bromo_6 423 532 IPR001487 GO:0005515
Gabi2909g00021 540 Pfam Acetyltransferase (GNAT) family 241 320 IPR000182 GO:0016747
Gabi2909g00021 540 ProSiteProfiles Bromodomain profile. 442 513 IPR001487 GO:0005515
Gabi2909g00021 540 SUPERFAMILY Bromodomain 415 528 IPR036427 GO:0005515
Gabi2909g00021 540 FunFam Histone acetyltransferase KAT2A 192 356 - -
Gabi2909g00021 540 MobiDBLite consensus disorder prediction 99 132 - -
Gabi2909g00021 540 Gene3D - 421 536 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00021 Gabi-Chr2909 187426 203540 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi2909g00021 Bromodomain 7.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00021 K06062 - gmx:100791610 882.863