Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00020 ATGGCCAACAGAGTTCAAATTCCCACAAACAATGCAGCACTCATTGCTATGATCGCTGATGAGGACACTGTAGTTGGATTTTTGCTGGCTGGAGTGGGTAATGTTGACTTGCGAAGGAAGACAAATTACCTCATTGTGGACTCAAAAACAACTGTCAAACAAATTGAAGATGCATTCAAAGAGTTCACAGCAAGGGAAGATATTGCAATAGTGTTGATAAGCCAATATGTTGCAAATATGATAAGGTTTTTAGTTGATAGCTACAACAAGCCTGTTCCTGCAATATTGGAGATTCCTTCCAAAGACCATCCTTATGATCCTGCGCATGATTCAGTTCTTTCTCGAGTGAAGTACCTCTTCTCTTCTGAATCTGTGGCTTCTGGGAGACGCTAA 393 0.4097 MANRVQIPTNNAALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTAREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSSESVASGRR 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00020 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Gabi2909g00020 130 FunFam V-type proton ATPase subunit F 9 122 - -
Gabi2909g00020 130 NCBIfam V-type ATPase subunit F 11 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
Gabi2909g00020 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Gabi2909g00020 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Gabi2909g00020 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 126 - -
Gabi2909g00020 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00020 Gabi-Chr2909 181799 185357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2909g00020 1 126 Primary Pumps ATPases(2) AT4G02620 87.302 2.37e-81 233