Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00015 ATGGAGAATCCAATGGGTAGCTACGAAACTGAGCTGAATCTCAAGGCCACAGAGTTAAGGTTAGGATTACCAGGCAGCGATAGTTCATGCAGTGGCTCTGTTGTTAGAAGCAACAAGAGATCTTCACCGGAAGCCAGTACTGTGGAAGAGTCCATGTGCAAGAGCAATGTTAATTCTAATGCTTCTGACTCCACTTTAACCATAAGTGATCATGACCAAGATTGTGTCCAACCTGCAAAGGTACAAGTAGTGGGATGGCCACCAATTCGATCTTATAGGAAGAACAGTGTACAACAGAAGAAGAAGGTGGAACAGAGTGATGGAGCTGGAATGTACGTGAAAGTGAGCATGGCTGGTGCACCTTACTTGAGGAAGATAGATCTCATGGTTTACAAGAGCTATTCAGAACTCCTCATGGCCTTGGAAAGTTTGTTCAAGTGCACTTTTGGTGAATATTCAGAAAGAGAAGGGTACAATGGATCCGAATATGCTCCTACTTATGAAGACAAGGATGGTGACTGGATGCTGGTTGGAGATGTTCCATGGGACATGTTCATGTCCTCATGCAAGAGGCTGAGAATAATGAAAGGATCAGAAGCAAAGGGGTTGGGTTGTTTATGA 621 0.4412 MENPMGSYETELNLKATELRLGLPGSDSSCSGSVVRSNKRSSPEASTVEESMCKSNVNSNASDSTLTISDHDQDCVQPAKVQVVGWPPIRSYRKNSVQQKKKVEQSDGAGMYVKVSMAGAPYLRKIDLMVYKSYSELLMALESLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLGCL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00015 206 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 201 IPR003311 GO:0005634|GO:0006355
Gabi2909g00015 206 FunFam Auxin-responsive protein 104 206 - -
Gabi2909g00015 206 ProSiteProfiles PB1 domain profile. 110 197 IPR000270 GO:0005515
Gabi2909g00015 206 MobiDBLite consensus disorder prediction 24 57 - -
Gabi2909g00015 206 SUPERFAMILY CAD & PB1 domains 107 196 - -
Gabi2909g00015 206 Gene3D - 104 206 - -
Gabi2909g00015 206 MobiDBLite consensus disorder prediction 20 57 - -
Gabi2909g00015 206 Pfam AUX/IAA family 17 204 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00015 Gabi-Chr2909 160087 161387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2909g00015 41 203 B3 DNA Binding Superfamily AT2G46530 30.675 1.23e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gabi2909g00015 AUX_IAA 8.4e-58 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00015 K14484 - gmx:100792134 312.383