Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00014 ATGGAGGTTGGACTGATGAAGAAGGAGAATATGGGGTTTGAGGAAACTGAACTGAGGCTTGGATTGCCTGGAAACGGAACCACAGCCACTGAAGAAGTAGTAAGGAAGAGAGGATTCTCTGAGACTGAAACTGATGAGACAATAACCACAGTGGATTTTATGCTTAATCTTTCATCTAAGGAAGCAACTTCTGGGTCAGATCTAAGTCATAAGCACAACACTTTGCCTAATGAGAAAACCCTTCTGCCTGCAGATCCTGCCAAGCCTCCAGCCAAGGCACAAGTGGTGGGTTGGCCACCTGTCCGGTCCTTCCGGAAGAACATGTTGGCTGTGCAAAAAAGCGTTGGAGAGGAGAGTGAGAAGAACAACCCTAATGCAAGCTTTGTTAAAGTTAGCATGGATGGAGCACCTTACCTCCGCAAAGTGGACTTGAAGATGTACAAGAGTTACCAAGACCTCTCCGATTCTTTAGGCAAAATGTTCAGCTCCTTCACCATTGGCAATTGTGGATACCAAGGAATGAAAGATTTCATGAATGAGAGTAAGCTGATGGATCTTTTGGACAGCTCTGATTATGTCCCAGCCTATGAAGACAAGGATGGTGACTGGATGCTTGTCGGGGATGTCCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGTATCATGAAAGGAAAGGAGGCTATTGGTCTTGCACCAAGAGCTATGGAGAAATGCAAGAACAGGAGCTAG 735 0.4571 MEVGLMKKENMGFEETELRLGLPGNGTTATEEVVRKRGFSETETDETITTVDFMLNLSSKEATSGSDLSHKHNTLPNEKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAVQKSVGEESEKNNPNASFVKVSMDGAPYLRKVDLKMYKSYQDLSDSLGKMFSSFTIGNCGYQGMKDFMNESKLMDLLDSSDYVPAYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKCKNRS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00014 244 SUPERFAMILY CAD & PB1 domains 121 225 - -
Gabi2909g00014 244 Gene3D - 120 238 - -
Gabi2909g00014 244 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 231 IPR003311 GO:0005634|GO:0006355
Gabi2909g00014 244 ProSiteProfiles PB1 domain profile. 126 226 IPR000270 GO:0005515
Gabi2909g00014 244 Pfam AUX/IAA family 15 235 IPR033389 -
Gabi2909g00014 244 FunFam Auxin-responsive protein 121 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00014 Gabi-Chr2909 134176 137267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2909g00014 118 229 B3 DNA Binding Superfamily AT3G61830 32.143 7.32e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gabi2909g00014 AUX_IAA 4.9e-84 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00014 K14484 - gmx:100810013 390.193