Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00006 ATGGCTCTTGCTGGGTCTGTAGTGGAGCTTCAATCTTCTTCTTCTATAAAGAAGAAAACTGCTGTTTCAAGAAGCTGGATTTTGCTCGACCATGATGGTAGAGGAACTATATTGGATGTGGACAAGTATGCTATTATGCGCCTGGTTGAAATTCACGCAAGAGATCTTCGAATTTTGGACCCTCTCCTATCATATCCTTCCACCATTCTCGGCAGAGAGAAAGTCATTGTTCTCAATTTAGAGCACATTAAAGCTATTATCACAGCGGATGAGGTGTTGTTAAGAGATCCAATGGATGATGACGTTGTGCCTATTGTTGAGGAGCTTCGACGACGGTTACCAAGAGAAACTGCTGCTGGACAAGGCCAATTAGGAGAAGAAGAGGCGTGTGCTCAAGACGAATTTCCATTTGAGCTTCGGGCCTTAGAAGTTGTATTAGAAGCAATTTGTAGTTTCCTTGATGCACGGACAAGAGAGTTAGAGACTGCTACTTACCCAGCTTTGGATGAACTCACCTCTAAGATCAGCAGTCGTAATTTGGATAGAGTGCGAAAACTGAAAAGTGCAATGACGAGGTTAACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAGAACCTACTTGATGATGATGGTGACATGGCTGATCTTTACTTATCAAGAAAGTTGACTGTTTCATCCTCTCCCGCAAGTAGCTATAATGCTCCCAACTGCCTTTATAGCTCTCCCAATCTAGGTTCAAAGATACAGAGATCAAGCAAAGCAAGTGCAACAACTGTTCAAGGGGAGAATGATGTTGAGGAGCTCGAAATGTTACTTGAGGCCTATTTCACGCAAATTGATGGCACACTAAATAAATTGACCACATTGCGAGAATATATTGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAATCAACTAATTCAGTTAGAACTCTTCCTTAGTTCTGGGACTGTCTGTCTGTCCATATATTCGTTGGTGGCTGCAATATTTGGTATGAACATTCCATATACATGGAGAGAAGGTCACGGATATATATTTAAATGGGTGGTGATCTTTTCGGGAATTGCTTGTGCATCTTTGTTTTTATCCATAATATCTTATGCACGACGCAAAGGTCTTGTGGGGTCTTGA 1149 0.4125 MALAGSVVELQSSSSIKKKTAVSRSWILLDHDGRGTILDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITADEVLLRDPMDDDVVPIVEELRRRLPRETAAGQGQLGEEEACAQDEFPFELRALEVVLEAICSFLDARTRELETATYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDGDMADLYLSRKLTVSSSPASSYNAPNCLYSSPNLGSKIQRSSKASATTVQGENDVEELEMLLEAYFTQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVAAIFGMNIPYTWREGHGYIFKWVVIFSGIACASLFLSIISYARRKGLVGS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00006 382 Coils Coil 183 210 - -
Gabi2909g00006 382 Gene3D Magnesium transport protein CorA, transmembrane region 103 312 - -
Gabi2909g00006 382 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 380 IPR039204 -
Gabi2909g00006 382 FunFam Magnesium transporter MRS2-5 115 312 - -
Gabi2909g00006 382 FunFam Magnesium transporter MRS2-1 14 97 - -
Gabi2909g00006 382 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 318 368 IPR045863 -
Gabi2909g00006 382 CDD Mrs2_Mfm1p-like 26 379 IPR039204 -
Gabi2909g00006 382 Gene3D - 8 97 - -
Gabi2909g00006 382 Pfam CorA-like Mg2+ transporter protein 267 368 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00006 Gabi-Chr2909 60566 64596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2909g00006 1 355 MRS2 Gene Family AT5G64560 73.171 3.38e-165 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00006 K16075 - gmx:100799368 615.92