Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2909g00005 ATGGCTCTTGCTGGGTCTGTAGTGGAGCTTCAATCTTCTTCTTCTATAAAGAAGAAAACTGCTGTTTCAAGAAGCTGGATTTTGCTCGACCATGATGGTAGAGGAACTATATTGGATGTGGACAAGTATGCTATTATGCGCCTGGTTGAAATTCACGCAAGAGATCTTCGAATTTTGGACCCTCTCCTATCATATCCTTCCACCATTCTCGGCAGAGAGAAAGTCATTGTTCTCAATTTAGAGCACATTAAAGCTATTATCACAGCGGATGAGGTGTTGTTAAGAGATCCAATGGATGATGACGTTGTGCCTATTGTTGAGGAGCTTCGACGACGGTTACCAAGAGAAACTGCTGCTGGACAAGGCCAATTAGGAGAAGAAGAGGCGTGTGCTCAAGACGAATTTCCATTTGAGCTTCGGGCCTTAGAAGTTGTATTAGAAGCAATTTGTAGTTTCCTTGATGCACGGACAAGAGAGTTAGAGACTGCTACTTACCCAGCTTTGGATGAACTCACCTCTAAGATCAGCAGTCGTAATTTGGATAGAGTGCGAAAACTGAAAAGTGCAATGACGAGGTTAACAAATCGAGTTCAAAAGATAAGAGATGAACTAGAGAACCTACTTGATGATGATGGTGACATGGCTGATCTTTACTTATCAAGAAAGTTGACTGTTTCATCCTCTCCCGCAAGTAGCTATAATGCTCCCAACTGCCTTTATAGCTCTCCCAATCTAGGTTCAAAGATACAGAGATCAAGCAAAGCAAGTGCAACAACTGTTCAAGGGGAGAATGATGTTGAGGAGCTCGAAATGTTACTTGAGTTGCGAGAATATATTGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAATCAACTAATTCAGTTAGAACTCTTCCTTAGTTCTGGGACTGTCTGTCTGTCCATATATTCGTTGGTGGCTGCAATATTTGGTATGAACATTCCATATACATGGAGAGAAGGTCACGGATATATATTTAAATGGGTGGTGATCTTTTCGGGAATTGCTTGTGCATCTTTGTTTTTATCCATAATATCTTATGCACGACGCAAAGGTCTTGTGGGGTCTTGA 1104 0.4139 MALAGSVVELQSSSSIKKKTAVSRSWILLDHDGRGTILDVDKYAIMRLVEIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITADEVLLRDPMDDDVVPIVEELRRRLPRETAAGQGQLGEEEACAQDEFPFELRALEVVLEAICSFLDARTRELETATYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKIRDELENLLDDDGDMADLYLSRKLTVSSSPASSYNAPNCLYSSPNLGSKIQRSSKASATTVQGENDVEELEMLLELREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVAAIFGMNIPYTWREGHGYIFKWVVIFSGIACASLFLSIISYARRKGLVGS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2909g00005 367 Coils Coil 183 210 - -
Gabi2909g00005 367 CDD Mrs2_Mfm1p-like 26 364 IPR039204 -
Gabi2909g00005 367 Gene3D Magnesium transport protein CorA, transmembrane region 103 297 - -
Gabi2909g00005 367 Gene3D - 8 97 - -
Gabi2909g00005 367 FunFam Magnesium transporter MRS2-1 14 97 - -
Gabi2909g00005 367 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 303 353 IPR045863 -
Gabi2909g00005 367 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 365 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2909g00005 Gabi-Chr2909 60566 64596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2909g00005 1 340 MRS2 Gene Family AT5G64560 69.919 2.05e-151 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2909g00005 K16075 - gmx:100799368 566.229