Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2907g00001 ATGAGGTCTCTTAGTCTGATAGCGACAGCTATTTGCTGTGTAGTGGTTGTGCTTGGAGGACTACCCATCTCCTCAGATGCACAGCTAGATCCCTCGTTTTACTTGAAAACTTGTCCTCAGGTTCATTCAATTGTTGTTGGAATTTTAAGTGGTGTTTCTACAAAAGATCCACGTATGCTTGCAAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGCTGTGATGCATCAATTTTGTTGAACAACACTGCTACGATAGTGAGCGAGCAACAAGCATTGCCAAATAACAACTCAATAAGGGGTTTGGATGTTGTGAACCAAATTAAGACAGCGGTGGAAAATTCTTGTCCCGGCGTAGTTTCTTGCGCTGATATTCTTGCCCTTGCTGCTTCAGTATCTTCTGCTCTGGCTCAAGGTCCTTTTTGGGTAGTTCCATTGGGAAGAAGGGATAGTTTAACAGCCAACCGAACCCTTGCAAATCAAAACCTTCCAGCTCCTTTCTTCAACCTAACTACACTTAAATCCTCCTTTGCTGTTCAAGGTCTCGACACTAATGATCTAGTTACACTCTCAGGTGCTCATACATTTGGCAGAGCTCACTGCTCTGTATTCGTAGACCGATTATACAACTTCAGCGGCACTGGCAAACCTGATCCAACTCTTGACACAACTTACTTACAACAATTGCGCAAAATATGTCCCAAGGGTGGGCCTGGGACACCCCTTGCCAATTTTGACCCAACAACACCTGATACATTCGACAAGAACTACTATTCCAATCTTCAGGGTCAAAAGGGTTTGCTTCAAAGTGACCAAGAACTGTTCTCAACAAAAGGTGCAGATACCATTAGCATTGTCAACAAGTTCGGTAGTAGCCAAGATGCTTTCTTTAATAGCTTTAAGGCTTCAATGATAAAGATGGGTAACATTGGTGTGCTAACTGGAACAAAAGGAGAAATCCGAAAACAATGCAATTTTGTTAACAAAAAATCTGTTGAACTTGATATAGCCAGTGTGGCCTCCTCCAAAGAATCATCGGACCAGGGTAAGGTTAGTTCATTCTAA 1071 0.4258 MRSLSLIATAICCVVVVLGGLPISSDAQLDPSFYLKTCPQVHSIVVGILSGVSTKDPRMLASLVRLHFHDCFVQGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNQIKTAVENSCPGVVSCADILALAASVSSALAQGPFWVVPLGRRDSLTANRTLANQNLPAPFFNLTTLKSSFAVQGLDTNDLVTLSGAHTFGRAHCSVFVDRLYNFSGTGKPDPTLDTTYLQQLRKICPKGGPGTPLANFDPTTPDTFDKNYYSNLQGQKGLLQSDQELFSTKGADTISIVNKFGSSQDAFFNSFKASMIKMGNIGVLTGTKGEIRKQCNFVNKKSVELDIASVASSKESSDQGKVSSF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2907g00001 356 Gene3D Peroxidase, domain 2 166 309 - -
Gabi2907g00001 356 PANTHER PEROXIDASE 72-RELATED 26 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 FunFam Peroxidase 166 309 - -
Gabi2907g00001 356 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 Gene3D - 33 330 - -
Gabi2907g00001 356 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 Pfam Peroxidase 54 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi2907g00001 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gabi2907g00001 356 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
Gabi2907g00001 356 FunFam Peroxidase 32 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2907g00001 Gabi-Chr2907 4770 8193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2907g00001 24 343 Peroxidase AT2G38380 56.656 2.84e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2907g00001 K00430 - gmx:547499 543.502