Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2901g00038 ATGAATACTTTTTCTCATGTTCCCCCCGGTTTTAGGTTCCATCCCACGGATGAAGAACTAGTTGATTACTACCTTAGGAAGAAAGTAACATCAAGGAGGATTGACCTTGATGTCATAAAAGATGTTGACCTCTACAAAATTGAGCCGTGGGATCTTCAAGAGATTTGCAGAATAGGAACAGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACAGGAACTCGCACGAATAGAGCAACAACAGCAGGATTTTGGAAAGCAACAGGAAGAGACAAGGCAATATATTCTAAGCATGACCTCATAGGGATGAGGAAAACCTTAGTCTTTTATAAAGGTCGAGCTCCAAATGGACAAAAATCAGATTGGATAATGCACGAGTATCGCCTTGAAACAGATGAAAATGGCGCACCACAGGCAAAAGGATGGGTTGTCTGTAGAGTATTCAAGAAGAGAGTAACAACAATGCGTAAAGTGAGTGAACATGAATCCTCCTGTTGGTATGATGACCAAGTCTCTTTCATGCATGACATGGACTCACCAAAGCAAAGCTCTCAATCTAATTTGGTCTACCAAATACCATATCCTTGCAAGAAAGAGCTAGATTTGCCATACCAATTGCCTCGAGAGCACTTTCACCAGCAGCTTCCACTTCTAGAGAGCCCAAAACTGCTTCAATCTGCTTCCACCATAGCCTCTATTAATCCCATGGCACCATATGATCATTTAGATGTCAACCATGCAACTGCTCTGATGCCCTCAACATTCATACAAGAAGAACAAGTTCAACAGCAAAACTTTCAGGCAATGTATGGAAACATTAATACCAATGAACAAGCTGTTGATCAAGTGACTGATTGGCGTGTGCTTGACAAGTTTGTTGCTTCACAACTTAGTCAAGATGCTTCCAAAGACAATAACTACTCAAACACAGGCAGCATCTTGCATGGCACGGACAATAGTAATGTACAGTTCAGAAATTTGGACAAACAAGAAATGGTGATTGAAAATGCCTCAACATCAAACTCCAGCTGCCCAATTGATTTATGGAAATAG 1071 0.4062 MNTFSHVPPGFRFHPTDEELVDYYLRKKVTSRRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGAPQAKGWVVCRVFKKRVTTMRKVSEHESSCWYDDQVSFMHDMDSPKQSSQSNLVYQIPYPCKKELDLPYQLPREHFHQQLPLLESPKLLQSASTIASINPMAPYDHLDVNHATALMPSTFIQEEQVQQQNFQAMYGNINTNEQAVDQVTDWRVLDKFVASQLSQDASKDNNYSNTGSILHGTDNSNVQFRNLDKQEMVIENASTSNSSCPIDLWK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2901g00038 356 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Gabi2901g00038 356 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Gabi2901g00038 356 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Gabi2901g00038 356 FunFam NAC domain-containing protein 16 160 - -
Gabi2901g00038 356 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 272 - -
Gabi2901g00038 356 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2901g00038 Gabi-Chr2901 394786 396831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2901g00038 1 356 NAC Transcription Factor Family AT1G12260 56.793 1.57e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2901g00038 NAM 3.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2901g00038 - - gmx:100809525 595.89