Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2901g00034 ATGGACTTGAAGTCAAATCATAATCCTGTTCTCACGGATACTGCACACATAACAAAGTCAAGACTGGGTGTGCATTCTAGTTTGTTGCCTTACTCCCATCCTGGGGCAACCTTTCCACATGGTTTGTTGTTGAATATCCCAAGGAGGAAGACAGGAATTCTTGAAGATGTCCGTTCTAGTGGTTGGTTGGATGCCATGAAATCATCTTCGCCTCCACCCAAGAAGATAGCAAAGGATGTTTGTCATGGGTTTGCATCACCTGAAGCTGATACTGCTAGTGCTTATTTTAACTGGCTGCTAAAATATCCATCAGCTCTAATGTCTTTTGAGCAAATCATGAACTATGCTAAAGGCAAGAAAATCGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAGGTGGCAGAATATTTTCCAACAGCAATAATTAGTGGAAGAAGTCGCGACAAGGTATCTGAATTTGTAGGACTAACAGAACTCTATTATGCTGGTAGTCATGGGATGGACATCATTGGCCCTGTTAGACAATCTGTATCTGATAACCACCCAAATTCAATCATTAGGCATACAGACAAGCAGGGTAAGGAAGTTAATTTATTCCAACCTGCTGCTGAGTTCCTTCCCATGATTGATGAGGTATTGAAGTGTCTCGTTGAGATTACGAAAGACATTAAAGGAGCAAAAGTTGAGAACAATAAATTTTGTGTATCTGTACATTACCGCAATGTAGATGAGAAGAGTTGGGATATGGTGGGGCAATGTGTTCATGATGTTCTGAAGGGCTATCCACGTTTGCGATTAACTCATGGGCGCAAGGTTTTAGAGGTCCGACCCGTGATTAACTGGGATAAGGGAAAAGCTGTCACATTTTTACTTGAGTCCCTTGGACTTAGCAATAGTGATGATGTGCTTCCTATTTATATTGGAGATGATCGGACAGATGAAGATGCATTTAAGGTTTTGAGAGAGGGAAATAAAGGTTATGGGATCTTAGTGTCTTCAGCACCAAAGGAAAGCAACGCAATTTACTCTCTTCGGGACCCATCGGAGGTCTTGGAATTTCTCAAGTCACTTGTGATGTGGAAGTCAAGCCCCATAAAGAGTCTTATATAG 1173 0.4126 MDLKSNHNPVLTDTAHITKSRLGVHSSLLPYSHPGATFPHGLLLNIPRRKTGILEDVRSSGWLDAMKSSSPPPKKIAKDVCHGFASPEADTASAYFNWLLKYPSALMSFEQIMNYAKGKKIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVSEFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNSIIRHTDKQGKEVNLFQPAAEFLPMIDEVLKCLVEITKDIKGAKVENNKFCVSVHYRNVDEKSWDMVGQCVHDVLKGYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLSNSDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNAIYSLRDPSEVLEFLKSLVMWKSSPIKSLI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2901g00034 390 CDD HAD_TPP 122 371 - -
Gabi2901g00034 390 FunFam Trehalose 6-phosphate phosphatase 229 388 - -
Gabi2901g00034 390 Gene3D - 121 216 IPR023214 -
Gabi2901g00034 390 Gene3D - 219 387 IPR023214 -
Gabi2901g00034 390 Pfam Trehalose-phosphatase 124 369 IPR003337 GO:0003824|GO:0005992
Gabi2901g00034 390 FunFam Trehalose 6-phosphate phosphatase 121 209 - -
Gabi2901g00034 390 NCBIfam HAD-IIB family hydrolase 123 342 IPR006379 -
Gabi2901g00034 390 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 384 IPR044651 GO:0004805|GO:0005992
Gabi2901g00034 390 SUPERFAMILY HAD-like 122 381 IPR036412 -
Gabi2901g00034 390 NCBIfam trehalose-phosphatase 224 379 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2901g00034 Gabi-Chr2901 345399 350697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2901g00034 107 378 Trehalose Biosynthesis Gene Families AT1G70290 26.531 8.15e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2901g00034 K01087 - gmx:100819495 687.182