Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2901g00004 ATGTCTGCCTTCAGCGCTCTCCGATCGTCAAAACTCGTCTCATGGAAACCCACCGGCATGTTTCAGCAAACCCTAGCGGGTTGCGTTGAGCGTAGGGGTAAGGCTTTACATTCGGGAAAGGTTTCGACGGTGAGATTGTGCCCTGGATTCGCTGGCCATGGGAGGTACTTTGATTTTCGCTCCAATTCGATTCCAGCGTCTGTTGATTTTGCTCAGGTGTCGCCTCTCTGCACCACTTTGTGTAAAGACGGTTTTCGAATTCAAACCGTGGAGCACTTGCTTTCTGCTTTGGAGGCTGCTGGTGTTGATAATTGTAGAATTGAGATAGAGAATTCGGATGCTCAAGGGAATGATGCTGAGATTCCTATATTTGATGGGTCAGCAAGGGAATGGGTGGCAGCAGTAGAAGAAGTTGGTTTAAAGGTGGCAACTGATCTCGAGGGCAAAAGCTGTGAGAAAATGGCGCCACATGTGAATGAACCAGTGAATGTTTGGAGAAATGATTCTTTTATTGCTGCATTTCCTTCTGAAGTGGTTCAAATAACTTATGGCATCAGCTTTCCACAGGCACCTGCTATTGGCTGCCAGTGGTTTTCTACAACCCCCTTGGATTATTTGGTTTATTCCATGCAGATAGCTTTGTCAAGAACCTTCTGCATTTACGAGGAGGTCGAGCAAATGCGTAATGCTGGACTTATCAAAGGGGGTTCTCTAGAAAATGCCATTGTGTGTAGTGCCAGTAAAGGTTGGTTGAATCCACCTCTGCATTTCAGTGATGAACCTTGTCGACACAAGATCTTAGATCTTATTGGTGATCTCTCGCTGTTTGCTCAGTTTGGGAATCAAGGACTCCCAGTGGCACACATTGTAGCTTACAAGGGTGGCCATGCATTGCATGCTGATTTGGCACGCCGCCTGATGGGAATGATTTGA 933 0.4662 MSAFSALRSSKLVSWKPTGMFQQTLAGCVERRGKALHSGKVSTVRLCPGFAGHGRYFDFRSNSIPASVDFAQVSPLCTTLCKDGFRIQTVEHLLSALEAAGVDNCRIEIENSDAQGNDAEIPIFDGSAREWVAAVEEVGLKVATDLEGKSCEKMAPHVNEPVNVWRNDSFIAAFPSEVVQITYGISFPQAPAIGCQWFSTTPLDYLVYSMQIALSRTFCIYEEVEQMRNAGLIKGGSLENAIVCSASKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQFGNQGLPVAHIVAYKGGHALHADLARRLMGMI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2901g00004 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 307 IPR020568 -
Gabi2901g00004 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 20 141 IPR020568 -
Gabi2901g00004 310 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 308 IPR004463 GO:0008759|GO:0009245
Gabi2901g00004 310 Gene3D lpxc deacetylase, domain 1 20 146 IPR015870 GO:0008759|GO:0009245
Gabi2901g00004 310 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 307 IPR004463 GO:0008759|GO:0009245
Gabi2901g00004 310 Gene3D lpxc deacetylase, domain 2 157 310 IPR011334 GO:0008759|GO:0009245
Gabi2901g00004 310 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 21 306 IPR004463 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2901g00004 4 306 Carbohydrate Esterase AT1G25054 65.347 1.09e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2901g00004 K02535 - gmx:100814465 553.518