Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2900g00001 ATGGAGTTTAACAAACCTCTATGCCTTTTCTTTTTTCTCTTTACTCTTCTCTCAAGCTCTCAAGCCTACAAATTCTACGTTGGTGGAAGCAATGGTTGGGTTCCAAACCCTTCCGAGAGTTACAATCAATGGGCTGGAAGGAACAGGTTCCAAGTCAATGACACTCTAGTTTTCAAGTACAAGAAAGGTTCAGACTCAGTGTTGGAAGTCAACAAGGAGGGTTATGACAAGTGCAACAAAACGAACCCAATCAAGAAGTTCGAAGAGGGTGACACAGAGTTCATGTTTGATCGATCAGGACCATTCTATTTCATCAGTGGAAAAGATGGGAACTGTGAAAAGGGTCAAAAGTTGAACCTTGTGGTTTTGACACCAAGAGGACAAAAACAAACACCACCGTCACCACCACCAAAATCTTCACCTTCACATTCACCATCGCCATCACCTAGTGGTGGTGGCATAGCACCAGTTTCACCATCGCCAAAGCCAATTCCGCCATCTGGGTCTCCGCCGGCGTCGCCACCCACCTCGCCGTCTCCCTCTGTTTCACCATCACCGGCGGTAAAACCTCCGTCTGCGTCTCCGGCGCCGGGAGCTAAATCACCATCTCCGTCTCCGATGGGTGCCCCTGTACCGGCAGGTGGACCTTCGGTCTCACCCCCGGCTCCGGCGCCTAAATCACCATCCCCGTCTCCGGCGGGTGCACCTGGACCGGCCGGTGTACCTCCGGCTCCATCTCCGGCGACGGGGACTACACCTCCATCGCCGTCTCCTTCAGGTTCTGGTCCTGCCACATCGCCACCACCGTCCCCTTCCGGTACACCTCCGTCGGCGTCCCCATCATCGCCGACGTCGGCGACGCCGGGATCATCACCGCCGTCGTCCAATGAAACGGCGCCGGCACCCGGAAAAAGTGGATCATCTGCATGGGTTGTGGGTCGTCCTTCAAGCTTTTTGGTGTATTCGGTAGCCATTGTTGTCGGTGCTGCGTTGTTGCGTTAA 1002 0.5409 MEFNKPLCLFFFLFTLLSSSQAYKFYVGGSNGWVPNPSESYNQWAGRNRFQVNDTLVFKYKKGSDSVLEVNKEGYDKCNKTNPIKKFEEGDTEFMFDRSGPFYFISGKDGNCEKGQKLNLVVLTPRGQKQTPPSPPPKSSPSHSPSPSPSGGGIAPVSPSPKPIPPSGSPPASPPTSPSPSVSPSPAVKPPSASPAPGAKSPSPSPMGAPVPAGGPSVSPPAPAPKSPSPSPAGAPGPAGVPPAPSPATGTTPPSPSPSGSGPATSPPPSPSGTPPSASPSSPTSATPGSSPPSSNETAPAPGKSGSSAWVVGRPSSFLVYSVAIVVGAALLR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2900g00001 333 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Gabi2900g00001 333 CDD OsENODL1_like 23 123 IPR041846 -
Gabi2900g00001 333 MobiDBLite consensus disorder prediction 126 311 - -
Gabi2900g00001 333 Gene3D - 21 126 IPR008972 -
Gabi2900g00001 333 FunFam Early nodulin-like protein 1 22 127 - -
Gabi2900g00001 333 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Gabi2900g00001 333 PRINTS Proline rich extensin signature 133 149 - -
Gabi2900g00001 333 PRINTS Proline rich extensin signature 154 166 - -
Gabi2900g00001 333 PRINTS Proline rich extensin signature 191 207 - -
Gabi2900g00001 333 PRINTS Proline rich extensin signature 166 187 - -
Gabi2900g00001 333 PANTHER BLUE COPPER PROTEIN 23 181 IPR039391 GO:0009055
Gabi2900g00001 333 MobiDBLite consensus disorder prediction 152 282 - -
Gabi2900g00001 333 MobiDBLite consensus disorder prediction 129 144 - -
Gabi2900g00001 333 MobiDBLite consensus disorder prediction 283 303 - -
Gabi2900g00001 333 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2900g00001 Gabi-Chr2900 21501 23017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2900g00001 5 236 Phytocyanin Superfamily AT5G53870 42.963 5.65e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2900g00001 - - gmx:100795901 220.705