Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi289g00008 ATGGAAGGCCCCGTCACTCCCTCCTGCAATGCCGGCACACCACCGCGTCGCAGTATCCGCCGGAGGTTAGTCCAATCGACGCTCTTCCCTCACAAGCCACCAGAACCTAATGAAAAGGACAACGAAGAGGATGAACAAGACGAGGATTACTGCGACACTGTCAATCATAAGAAGAGGAAGCCCAAGGGAAAAGTCACTCCTCGAAAAAAAAGTTCCAATAATGCCACGGCAAAGAAAAATGTACCAGCTAATGGGATTAAGGGGTCAACTTCACGGCAAGTGTTGGCTAATTCTGCTCAGGTTTATACAACGGTGCCTGATTTGCGGTTAGAGGCTAAATTGTCAGCTGAGGAAAATTCGAGGATGTTTGCAGGACGGCAAATACATCCATTTTTTTCATCAAGGAAGGTGGGGAAGAAAGTTCACGACCTGGATGAATCAGGAAGTAATTCGTGCACAGCTAAGAGTGAGGATGAAAGGGTTACCTGTGGCCCTATTCATGTATTTGAGAATATTCAGGATGATACCTCATCCATTGATTGGAGAAACTGGACGTTTTTGGGAAATACCACCTATGCGAGTTATGGTCCAGAAATTTTAAATTCATCTGTTTTGGAGGGTTCTGTTGAATCCTTAAATTTTGATAAGCTTCTCAGTATTTTGGATCCACCAGGTGCTTCAATTTCTCAGAATGCCTTATCTTCTTCAGATCGACTTTCTATACATCCAGAAAATCTGCAAGAAATATCCCCATCAAACTCAGCTTCACTAGCAGAATACACAATATGTCCTCAGATGGCAAAAGATGCTGAAGTGGACTTGGAGGTGGATGATTCTGTTATTTTATCTGTGCAAGCTGGCATTTTTAGAAAGACAGATACTGAGCCACTGAGTAGATTTCTTCAAGAAAGCATGAGGTCATACTACCGTAGTTGTGAAGATAAGGTTGAGAGCAGCTTATGGACATACAAATACAAACCGACAAAGGCTGTTGAGGTATGTGGTAATGATGAATCTGTGAATTTCTTGCGTGACTGGCTACATCTTTGGCATGAAAGGCGTTATCAAAGCAGGAAGGATTCCTCAAACAGGGATAAAAGTGACATGCAAGACGATGACGATGATTATAACTGTTCTCACAGTGACTACCGTTCAGAAGATATAGATGAGGATGATTCCCTGCAGAATGTTCTTTTAATTACAGGACCTATCGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGACGTTTTAGAGCTCAATGCATCTGATAGTAGAAATGGGACTGTTCTGAAGCAGTACTTTGGAGATGCTCTTGGTTCACTTGGGTTCAAAAGATTACTGGAACACACTGCGAGTTCACAGAAGAAAACTACAAAATTGACCCCGGCTCCAACTTTGTTCAATGGTAAAACTGCTGATGAGGTGAATGGTGGGGTGGTTGAACTGATTTCCATATCTGATGATGAAGCTCATGACCCTGGTAGAGCATCACAGAAATTACTTGGCAAAAATAATGTAGTTGCATGTGATAAAGTCCAAACTTTAATTCTAGTTGAGGACGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCGATACAACAAATTGCTGAGACAGCAAGGGGGCCAATTATATTGACCAGCAATAGTGATAATCCTGGCCTGCCTGAAAATTTTGATAGGCTCCATGTCTCGTTCTCATTGCCATTGCCAAAGGAATTGCTTTGCCATTTGTACACTGTTTGTCTCACAGAAGGAGTAAACATCCATCCTCTTTTACTGGAGAAGTTTATGCAGTCTTGTGATGGAGATATCCGAAAAACCATTATGCATCTTCAGTTCTGGCTCCAGAGTAAAAGATTTATAAAAGATGGAAAAGCGCAAATACGTTTTGGCTCACTTCCATTCGATCTTGAGGTTGGCCATCAGATACTACCAAAGATAATGCCCTGGGATTTCCCCTCAGAGTTATCCGAACTAATTGAGAACGAATTAAACTCTAGCTTTCAAGGGTTAGTTAAGGAAGACCATCTTCATATAAATGAAAGGCAAAACGATTTAGATGTGCAGTATATGGAGACTGATTACATAGAGGCCAAGAAGGTGGAGATGATAAAGAGAAATGGATCTATAACAGATTACAGGGAGCTTGAAATTCAATATAATGCTATTTCTGAGTTTTCCAATTCTTCTGGATCCCCACTAGCATCCTCTCGGCAAAATGGTCGAAGGAAACTTGTAGTAATGTCCTCTGATTCCGAGGATGAGGATACGAATAATGGATACCCTCTAGACACACATGACGAAGCTAACAAGAGACAATCCATCAAAGAAAATAATGTATGTCCCTCTGAGTTTCAATTGAACGAAAACTACCCCAGCACATCAGTTCGCAAACTGATTTATTCTGAATCGGAGGATTCAGAAGAGGACTGTTTTCAATCTTCAGCAACAGCCGATGATACATGCTTAAATGAAACATGTAAATTTTCTGATATATCCTGTGTGCCAGAATCAACGATTGTTCCTGAGACTGCAATTGAAAATGGAACAGAGACAATGTCTGGAGCAGTGACTTCCGGCCATTTTGTTGGTCCTCTAGAAGTTTCTGTGAATAATGAGTTGAAACCATTCACTTTCAGTGTTCGTAAGCGCTTGACAAAAGTGTCACAAAATTCAGATTTGTTGGTGAATACTGAAATTCCAGATTCTTCTCCAAAAGAGGTTCTGCAAGATTTTCTAGATGAAAATATGGAAACTAAAATTGCCAATGTGATGGATGAATGCAGTCGTGTGGGTTTCAATATAAAATCAACGTCTGTTGAGTCCAGTTCATCAATGGAGACAGATATGGTACAAAACTTATGGAGAAAACTCCGTGACCGTGACTGTCGAATGGATTTAAGACAGCAAGCTACCCCAGAACAGCTAGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGGCTGAGCAATCTAATTTCAGAAGCTGACTTGTTTTATGATCACGAACAAAAACATGATATTATGGAACCTCCAACGGTCCTTTCTGATGAACCAACATCTAGTTGGTATGATAAGCAAATATTGATGTCCACAGTTGCTGTACACGGGTTTTGTTTTTATGCTAAACTTATAGCAGATGTGGGGTCAAAGTTGGGTTATGCGAACAGGGTTGATTTAACTTCTGAGATGTTGGCTTCCACAACTAATGTTATGGCACTGGGGAAATTATCCGGACATGATCTCTCAAAAAGCACGATTATCTATACTGGAAAGGATTTAGAGTTGAACAACCCAATAAGTGATATGCAGAAGAGCCTGCATTACAGTGAAAACAAAACATCCCTGTTCCACCTCATCCATTCCATTGTTCCTGCAAGAATATCCTTGGCACTGAAAGGTGTTGCATTCAATGAATATCTATCTTCATTGCGCCAAATTTCGAGGTCAGAAGCTTTCCGCATTTCACAAGGCGCTGAGAAGAGAAAAGGAAGGGTGCGGGGTGCTCAACATTACTTGAGCACATGTACAATGTTGTCTCCTGAAGATATATCTTTGGTGAGTGAGGGTGATTTGTACAGAAAGATTTCTTCACAATATACAACTAACACCGAAAGCCAATTGTAA 3654 0.4113 MEGPVTPSCNAGTPPRRSIRRRLVQSTLFPHKPPEPNEKDNEEDEQDEDYCDTVNHKKRKPKGKVTPRKKSSNNATAKKNVPANGIKGSTSRQVLANSAQVYTTVPDLRLEAKLSAEENSRMFAGRQIHPFFSSRKVGKKVHDLDESGSNSCTAKSEDERVTCGPIHVFENIQDDTSSIDWRNWTFLGNTTYASYGPEILNSSVLEGSVESLNFDKLLSILDPPGASISQNALSSSDRLSIHPENLQEISPSNSASLAEYTICPQMAKDAEVDLEVDDSVILSVQAGIFRKTDTEPLSRFLQESMRSYYRSCEDKVESSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYQSRKDSSNRDKSDMQDDDDDYNCSHSDYRSEDIDEDDSLQNVLLITGPIGSGKSAAVYACAQEQGFDVLELNASDSRNGTVLKQYFGDALGSLGFKRLLEHTASSQKKTTKLTPAPTLFNGKTADEVNGGVVELISISDDEAHDPGRASQKLLGKNNVVACDKVQTLILVEDVDILFPEDRGCIAAIQQIAETARGPIILTSNSDNPGLPENFDRLHVSFSLPLPKELLCHLYTVCLTEGVNIHPLLLEKFMQSCDGDIRKTIMHLQFWLQSKRFIKDGKAQIRFGSLPFDLEVGHQILPKIMPWDFPSELSELIENELNSSFQGLVKEDHLHINERQNDLDVQYMETDYIEAKKVEMIKRNGSITDYRELEIQYNAISEFSNSSGSPLASSRQNGRRKLVVMSSDSEDEDTNNGYPLDTHDEANKRQSIKENNVCPSEFQLNENYPSTSVRKLIYSESEDSEEDCFQSSATADDTCLNETCKFSDISCVPESTIVPETAIENGTETMSGAVTSGHFVGPLEVSVNNELKPFTFSVRKRLTKVSQNSDLLVNTEIPDSSPKEVLQDFLDENMETKIANVMDECSRVGFNIKSTSVESSSSMETDMVQNLWRKLRDRDCRMDLRQQATPEQLGAFQVVKLASGLSNLISEADLFYDHEQKHDIMEPPTVLSDEPTSSWYDKQILMSTVAVHGFCFYAKLIADVGSKLGYANRVDLTSEMLASTTNVMALGKLSGHDLSKSTIIYTGKDLELNNPISDMQKSLHYSENKTSLFHLIHSIVPARISLALKGVAFNEYLSSLRQISRSEAFRISQGAEKRKGRVRGAQHYLSTCTMLSPEDISLVSEGDLYRKISSQYTTNTESQL 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi289g00008 1217 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 10 1207 IPR004582 GO:0006281
Gabi289g00008 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 632 IPR027417 -
Gabi289g00008 1217 MobiDBLite consensus disorder prediction 68 89 - -
Gabi289g00008 1217 MobiDBLite consensus disorder prediction 758 779 - -
Gabi289g00008 1217 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 580 640 - -
Gabi289g00008 1217 Gene3D - 578 639 - -
Gabi289g00008 1217 MobiDBLite consensus disorder prediction 1 89 - -
Gabi289g00008 1217 Gene3D - 318 573 IPR027417 -
Gabi289g00008 1217 MobiDBLite consensus disorder prediction 358 389 - -
Gabi289g00008 1217 SMART AAA_5 394 583 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi289g00008 Gabi-Chr289 59941 71886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi289g00008 316 491 Core DNA Replication Machinery Family AT5G22010 28.804 2.63e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi289g00008 K26118 - gmx:100784209 1659.43