Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2888g00038 ATGGCTGGGATTTGCTGTGGTGTTGTTGGAGAAGGTGAAACTCCGGCTCCAATTGAGCCAAGTTCACGGCCTTCCCGGCGCCGGAGTTTGGACCTTCTTCCGTTGAAATATATGGCCGACATGGCAGTGCCATCGTCGGACACTTCCCGGAAACGCCACAGACTGGATCTCTGTCCTAAGGATTGTGAAGAATCCAGTGCCGCCGCCGCCGGCGGCGGCGGTGGCGTCGGCGGATACGGGAAGAAGAAGGTGAAGGTAGACGAGGAGGATCCGAAACGTTCGAAGGTTTCTTCTTCTTCCTCCTCAACGGTGGGGGATTTGGAAGTTGAAGAGTGTCCCAAGTTTGGTGTTACTTCGGTTTGTGGTAGAAGAAGGGATATGGAAGATTCGGTTTCTGTTCACCCTTCGTTTTCTCAAGAAAAGTTTAACTACTTCGGTGTTTTCGACGGTCACGGTTGCTCACATGTTGCGACTATGTGTAAGGAGAGGCTACACGAGATTGTGAAGGAAGAGATTCACGTGGCGCGTGAGAATTTGGAGTGGAAATCGACGATGGAGCATGCTTTTGCTCGAATGGATGATGAGGTTCAGAGCTGGAGTCAGAGTAACCAGACCTCACCTTGTAGGTGTGAGCTTCAGACTCCTCACTGCGACGCCGTCGGATCCACCGCCGTCGTCGCCGTCGTCACCCAGGACAAGCTCGTCGTCTCCAACTGCGGCGACTCACGCGCCGTCCTCTGTCGAAAAGGCGTCGCCATCCCACTCTCCTCCGATCACAAGCCCGACCGACCCGACGAATTGCTCCGGGTTCAAGCCGCTGGAGGGCGCGTGATATATTGGGATGGGCCCAGAGTGCTTGGGGTGCTTGCTATGTCAAGAGCCATAGGTGACAATTATCTGAAGCCGTATGTGATTTCGGAACCGGAGGTGACGGTAACTGAGCGTAGCGACGAGGATGAGTGTTTGATTTTGGCGAGTGATGGACTATGGGACGTGGTGTCAAACGACACCGCATGTGGGGTGGTGAGGATGTGCCTCAAGGCCCAGAAGCTGCCGTCGCCGCCGCCTGGGTCTCCCGGGAGTGATGTGGCGGCGGATGGTTCGGACAGGGCTTGCTCCGATGCGTCAATTCTGTTGACCAAGTTGGCGTTGGCTAGGCATAGTTCGGATAATGTGAGCGTGGTGGTGGTTGATTTAAGGAGAGATCAACAACAACAACAATCATCCAATTCCAACGATTGTTAA 1245 0.5446 MAGICCGVVGEGETPAPIEPSSRPSRRRSLDLLPLKYMADMAVPSSDTSRKRHRLDLCPKDCEESSAAAAGGGGGVGGYGKKKVKVDEEDPKRSKVSSSSSSTVGDLEVEECPKFGVTSVCGRRRDMEDSVSVHPSFSQEKFNYFGVFDGHGCSHVATMCKERLHEIVKEEIHVARENLEWKSTMEHAFARMDDEVQSWSQSNQTSPCRCELQTPHCDAVGSTAVVAVVTQDKLVVSNCGDSRAVLCRKGVAIPLSSDHKPDRPDELLRVQAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSDEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPSPPPGSPGSDVAADGSDRACSDASILLTKLALARHSSDNVSVVVVDLRRDQQQQQSSNSNDC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2888g00038 414 SMART PP2C_4 102 397 IPR001932 -
Gabi2888g00038 414 FunFam Protein phosphatase 2C 37 109 406 - -
Gabi2888g00038 414 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
Gabi2888g00038 414 MobiDBLite consensus disorder prediction 64 104 - -
Gabi2888g00038 414 SMART PP2C_SIG_2 126 399 IPR001932 -
Gabi2888g00038 414 Gene3D - 109 409 IPR036457 -
Gabi2888g00038 414 MobiDBLite consensus disorder prediction 81 95 - -
Gabi2888g00038 414 CDD PP2Cc 114 351 IPR001932 -
Gabi2888g00038 414 SUPERFAMILY PP2C-like 113 400 IPR036457 -
Gabi2888g00038 414 MobiDBLite consensus disorder prediction 9 29 - -
Gabi2888g00038 414 PANTHER PROTEIN PHOSPHATASE 93 399 IPR015655 GO:0004722|GO:0006470
Gabi2888g00038 414 ProSiteProfiles PPM-type phosphatase domain profile. 114 399 IPR001932 -
Gabi2888g00038 414 Pfam Protein phosphatase 2C 115 391 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2888g00038 Gabi-Chr2888 339943 341987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2888g00038 1 409 PP2C-type Phosphatase Gene Family AT3G11410 58.314 4.79e-145 416