Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2888g00003 ATGGGTGATTCAATCGATTTGACTGGTGATGGAGGAGTCATTAAAACCACTGTGAGAAAAAGCAAATCCGATGCTGTCGCTCCAACAGAAAATTTTCCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGATACTGGTGAAGTTTTTGACACTACGCATGAAGATAACACTGTCTTCTCTTTTGAGCTTGGAAAGGGCAGTGTTATCAAGGCTTGGGAAATTGCAGTGAAAACCATGAAGGTTGGAGAAATTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGCAGTGCGGGATCTCCTCCAGATATTCCTCCAGATGCAACACTTGTTTTTGAAGTTGAGCTAGTTGCCTGTCGGCCACGAAAGGGCTCCAGTCTGGGAAGTGTTTCAGATGAGAGAGCTAGGCTAGAAGAGCTGAAGAAGCAAAGAGAGCTAGCTGCTGCTGCGAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCGGCTGCTGCACGCGTGCAAGCTAAGTTAGAAGCCAAGAAAGGTCAAGGAAAGGGTAAAGGTAAAGCAAAGTAG 567 0.448 MGDSIDLTGDGGVIKTTVRKSKSDAVAPTENFPLVDVHYEGTLADTGEVFDTTHEDNTVFSFELGKGSVIKAWEIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSSLGSVSDERARLEELKKQRELAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2888g00003 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Gabi2888g00003 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Gabi2888g00003 188 MobiDBLite consensus disorder prediction 150 166 - -
Gabi2888g00003 188 MobiDBLite consensus disorder prediction 150 188 - -
Gabi2888g00003 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 181 - -
Gabi2888g00003 188 Coils Coil 131 170 - -
Gabi2888g00003 188 FunFam Peptidylprolyl isomerase 1 120 - -
Gabi2888g00003 188 Gene3D - 3 120 IPR046357 GO:0003755
Gabi2888g00003 188 SUPERFAMILY FKBP-like 8 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2888g00003 Gabi-Chr2888 126000 129448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2888g00003 6 146 Calmodulin-binding Proteins AT5G48570 30.719 3.44e-10 56.6