Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2885g00044 ATGGCTCAGGCATCGTCAGTTCTAATGCAATTGCCGTCTGAGCCAAAATCAATCCTTTTCTTTTCTATTTTGTGCTTCATAAGTGTTATTATGTTCATGCTTAAGCTCAAAAGAAAAAACAATTACAATCTGCCTCCATCCCCACCAAAGCTACCAATTATTGGAAATCTTCATCAACTAGGCACACTCCCACACCGCTCCTTCCAAACACTCTCTAAAAAGTATGGCCCTCTCATGTTGTTGCAGCTTGGACAAACAAAAACTCTTGTGGTTTCATCAGCGGATATGGCAAGAGAAATAATAAAAACACATGATGTTGCTTTCTCCAACAGGCCTGAGTCTACAGCTGCTAAATTCTTACTCTATGGATACAAGGATATTGGTTTTGCACCCTACGGCGAAGAGTGGAGACAAAAAAAGAAGATATGTGTTCTTGAGCTTCTGAGCCAGAAAAGGGTGGGGTCTTTTCACTCTATCAGACAAGAAGAAGTTGCAGAATTGGTTGACACTATACGTGAAGCATGCGCGAGTAAAAAGTCCTTTGTGAATCTAAGTGAGATGTTATATGCAGCCTCAAACAATATAGTGTCTAGATGTGTTATAGGACAAAAATATGATACTCCAGACGGTACTGCAAGCATTGGAGTGCTAGCAAGGAAGACTATGAAACTAATAGCAGCTTTCAGCGTGGGTGATTTCTTCCCTTCATTGGGTTGGATTGATGTTCTCACGGGCTTAATTTCAGAAATTAAGTCCACTTCTGTTGCATTAGATGCTTTCTTTGATGAGGTAATTGCACAACAGAAGAAGAGCAACAAAAACGATGATAAAACCGATATTAAAGACTTTGCAGGGATCCTCCTTCAACTTCAAGAGGGTGGAAAGCTTGACTTTGAGCTTACACACGATAACCTCAAAGCACTCCTCACGGACATGTATCTCGGTGGAAGTGACACTACTGCAACGAATCTGGAATGGGTTTTTGCTGAGCTCGTTAAGAATCCAAATACCATGAAGAAAGTCCAAGAAGAGGTAAGAAGAGTTCTGGGGAAAAAATCAAAAGTGGATGAAAATGATGTGAATCAAATGAACTACTTGAAATGTGTAATCAAGGAAACTTTGAGATTACATCCACCTGTTCCACTTTTGGTTCCTCGAGAGACAGTATCAAGTGTGAAACTAAAAGGGTATGATATTCCCCCCAAAACAAGGGTATTTATGAACGCATGGGCAATACAGAGAGACCCTGAATTATGGGACAATCCTGAAGAGTTTCTTCCTGAGAGATTTGAAGGTAACCAAGTTGATGTTAAAGGACAAGATTTTCAATTAATACCATTTGGAATTGGGAGAAGGGGATGTCCTGGAATTTCGTTTGGGCTTGCTTCTACAGAGAATATACTTGCTAATCTTCTATTTTGGTTCGATTGGAAGCTACCTAAAACTGGTGTATTGATGCAGGACTTAGACATGAGTGAGGTGAATGGACTCACTGTCACCAAGAAAATACCACTTCATCTTAAACCAATACTATACTCATTTGGATCTAAACCTTGA 1557 0.3995 MAQASSVLMQLPSEPKSILFFSILCFISVIMFMLKLKRKNNYNLPPSPPKLPIIGNLHQLGTLPHRSFQTLSKKYGPLMLLQLGQTKTLVVSSADMAREIIKTHDVAFSNRPESTAAKFLLYGYKDIGFAPYGEEWRQKKKICVLELLSQKRVGSFHSIRQEEVAELVDTIREACASKKSFVNLSEMLYAASNNIVSRCVIGQKYDTPDGTASIGVLARKTMKLIAAFSVGDFFPSLGWIDVLTGLISEIKSTSVALDAFFDEVIAQQKKSNKNDDKTDIKDFAGILLQLQEGGKLDFELTHDNLKALLTDMYLGGSDTTATNLEWVFAELVKNPNTMKKVQEEVRRVLGKKSKVDENDVNQMNYLKCVIKETLRLHPPVPLLVPRETVSSVKLKGYDIPPKTRVFMNAWAIQRDPELWDNPEEFLPERFEGNQVDVKGQDFQLIPFGIGRRGCPGISFGLASTENILANLLFWFDWKLPKTGVLMQDLDMSEVNGLTVTKKIPLHLKPILYSFGSKP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2885g00044 518 Pfam Cytochrome P450 45 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 CDD CYP71-like 74 505 - -
Gabi2885g00044 518 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 FunFam Cytochrome P450 83B1 32 508 - -
Gabi2885g00044 518 PANTHER CYTOCHROME P450 71B11-RELATED 29 509 - -
Gabi2885g00044 518 SUPERFAMILY Cytochrome P450 45 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2885g00044 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Gabi2885g00044 518 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2885g00044 Gabi-Chr2885 390774 392485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2885g00044 45 510 Cytochrome P450 AT5G57260 44.820 7.55e-145 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2885g00044 K20617 - gmx:100792382 705.671